| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1338 |
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| Symbol | |
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| ID | 5694172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 1593913 |
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| End bp | 1595646 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641263930 |
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| Product | citrate transporter |
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| Protein accession | YP_001529219 |
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| Protein GI | 158521349 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACCTT CATCCTTTTT CACCACCATC CTGCTCCTGA TCTTCTCAAC ATCATTTGCC
TTTGCCGGTC ACGGGCCGGC TGGGGCGCCG CCCGCGGAGA TTCCCGCCGG CCACGTGGCG
ATCAACATTT CCGGCATCAT CACCGACAGC CATTCAGAGC CGGTCAATGA GGCGGAAATA
TCGGTATTTA TCGACAGGGC CCTGGTTTTT TCAGACACCA CGGCCCACGG TGGCAAATAC
CTGGCCCGGT TTGCCTGCCC GGAAGAGGCG CTGCCGGACA CCACCTTCAG CGTGATCGTG
CGAAAGGCCA GTTTTGCCAC CCAGACGTTT CAGATCACCG CAGACCAGTT CGCCCACCGG
GAGGGGAACT GTTTTATCAC CGAAGACATT GTTCTGCCCC GCCATCTGGG ACCGGCCTTC
TGGATCGCCA CCATCACCTT CGTGATGGCC TACATACTGA TCAGCTTCGA GCTGCTTCAC
CGGACCGTGG CCGCCATGCT GGGCGCGGCC CTTATGCTGG TCATCTCCTA TACCATCGGC
ACCATCAACC CGGAATTCCG GATTCTCTCT TATGAGGCGG CCATCGGCGC CATTGACATG
AACGTGATTT TCCTGCTCAT GGGCATGATG ATCATCATCG GCATTCTCAA GCACACCGGC
GTGTTCCAGT GGTGCGCCTA TCTTTCTTAC AAGCTGGCCA GGGGCAACGT GTTTGTGCTG
GCCGTTTACC TGATGATATT CACCGCCGTC TCCTCCGCGT TTCTGGACAA CGTGACCACC
ATGCTGCTGC TCACCGGCGT GGCCATTGAG ATCAGCCTGT CGCTGGCCAT CAACCCCCTG
ACCCTGCTGG TTCCCCTGGT GCTGGCCTCC AATGTCGGTG GTACCGCCAC CCTGATCGGC
GACCCGCCCA ACATCATGAT CGGCTCCTAC GCGGGCCTGA CGTTCACCCA GTTCGTGGTG
GCCCTGGCCC TGATCTGCGT GGTCTCCATG GTGGCCCTGG TACTCTATAC CAAACTGGTG
TGGGGCAGGG AGTACAAAGG AGCAAAAATC GACAACGTGG AAGCCTACAC CCGGGAACTC
AGGGAGCGCT ACAAAATCAC CGACGCCACC CTGCTCACAT ACGGCCTGGC CATCCTGGCC
TTTGTGGTGT TCCTGTTCCT TTCCCACGGG TTCTGGCACA TGGAGGTCAG CGTGGCGGCC
CTGATCGGGG CCTCGGTGTT TTTAACCATC GCCCTTGTCA CCGGCAAGGT GAACCTGCTG
GAGCTGATTG AAAAGGACAT TGAGTGGCCC ACCCTGATGT TCTTTATCTT CCTGTTCATG
CTGGTGGGAG CGGTTGAATC CAGCGGCCTG CTGGCCCTGA TCGCCGACTG GATCCTGGAA
CTGTCGGCCG GCAACTTTTT CGTGGCGTGC AGTCTGATCA TCTGGGTGGC GGCCATCATG
TCCGCTTTTG TGGACAACAT TCCCTTTACC GCCACCATGC TGCCCATTGT CGCCTACCTG
AGCACGGTCA TTCCCGGCGC GGAGAACACG CTCTGGTGGG CCCTGGCCCT GGGGGCCTGC
TTCGGCGGCA ACGGCACCAT GATCGGGGCC TCTGCCAACG TGGTCACTGT GGGCATCGCC
GAATCCAGGG GATATAAGAT CAGTTTTCTC CACTTCATGA AACTGGCCTT CCCTTTCATG
ATCATCAGCG TGGTCATCGC CCATGCGTGG CTGTTCATAT TCCGGCCCGT ATAA
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| Protein sequence | MRPSSFFTTI LLLIFSTSFA FAGHGPAGAP PAEIPAGHVA INISGIITDS HSEPVNEAEI
SVFIDRALVF SDTTAHGGKY LARFACPEEA LPDTTFSVIV RKASFATQTF QITADQFAHR
EGNCFITEDI VLPRHLGPAF WIATITFVMA YILISFELLH RTVAAMLGAA LMLVISYTIG
TINPEFRILS YEAAIGAIDM NVIFLLMGMM IIIGILKHTG VFQWCAYLSY KLARGNVFVL
AVYLMIFTAV SSAFLDNVTT MLLLTGVAIE ISLSLAINPL TLLVPLVLAS NVGGTATLIG
DPPNIMIGSY AGLTFTQFVV ALALICVVSM VALVLYTKLV WGREYKGAKI DNVEAYTREL
RERYKITDAT LLTYGLAILA FVVFLFLSHG FWHMEVSVAA LIGASVFLTI ALVTGKVNLL
ELIEKDIEWP TLMFFIFLFM LVGAVESSGL LALIADWILE LSAGNFFVAC SLIIWVAAIM
SAFVDNIPFT ATMLPIVAYL STVIPGAENT LWWALALGAC FGGNGTMIGA SANVVTVGIA
ESRGYKISFL HFMKLAFPFM IISVVIAHAW LFIFRPV
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