| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0378 |
|---|
| Symbol | |
|---|
| ID | 5693197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 437232 |
|---|
| End bp | 438944 |
|---|
| Gene Length | 1713 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641262959 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001528265 |
|---|
| Protein GI | 158520395 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000222085 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGTC AACCCGCCAT CATCAAGGAA AAACTGGCCG CCGTGGCCGC GCAGCGGCAA
AAGGCCCTGT CCCTTCCTGC CAAAGAAGCC ATGGACCTGA TTCTCGGCTC GCCGGACGCG
CCGGCCATTG TCCACTCCAT GGCCGACCAG GATTTTTATT TTCTGGTCAA CGACATCGGC
CCGGAAGATG CCCTTGAGCT GCTGGCTTTG GGGTCGGGCA GCCAGTGGGA ACACATCACT
GATATCGAGT GCTGGCACAA AGACCGAATC AGCGGGCCGG AAATGCTCCG GTGGTTTGAC
CTGCTGATGC GGGCCGACAA GAACCGGTTT GTGCAATGGA TGGCCGCTGA CAAACATGAG
CTTCTGGAGC TGCTGCTCTA CTACACCACC CAGGCATCGG CCCGGGAGCA CGACCAGGAG
CCGTCAGAGT TTGACGAGTC CTTTTTCACC TTTGACGATG TCTTTTACGT GCGGTTTACC
AAAAGATGGC CCCAGGACCC GGACCTGCCG GAAACCCTTG AGGCGGACCA CGAAAAGATG
CTCTACGCCT TTCTCAAACA CCTGGCTGAA ATCGATTTCA TCGCCTACAG GGACCTTCTT
TTTTATACCG CCAACGTGCT TCCCACGGAG GCCGAGGAGG AGGTCTTTCG GCAGCGCAGC
ATCCGGCTGG CGGAAAAGGG ACTGCTGCCT TTTGATGAAG CCGTCGGCAT TTATCAACCC
CTGCCGCAAG GCCGCAAACC CGTGAAAAAA CCGGCCCGCC GGCCGGCAAA GAGAAGCCGG
CTGCCGGTGC CCGTGGTCCA CCACCGGCTT TTGAAAAAAA CCACCCTGTT TGCCCAGGCC
CTGGAGCGGG TGGATTCCCC GGCGGCCCTG GAGGAACTCT CCACCGAATT TGCGGCCCTG
TGCAACAGCA TCGTGGTGGC TGACGGCGCC CGGCTGAGCG CAAAAAAAGA GCTGGCCCAC
GTGGTGAACA AGGCGTGCGG CTACATTGCC ATCGGCCTTT TTCGGCTGGC GGAAAGCAAG
GAGACCCTGA ACCCGTCAAA GGCCGCGGCC CTGATGACAA CCCACGCCCT GGGCGATATT
TTCCGATCCG GTTATGGCGC GGCCATGGAG ATCAAGCGAA CAGCGGACAG ATGGCATTCG
ACCAGCTGGT GTTCGGCCAA ACAGCTGCCC GTGAGTTTCT GGGGAGAAGA GCGCGCCGGA
ATCCTGGCCG GCCTGCTGAT CAAGCGGCCC CTGTTTTTCG ATGCGCAAAC AGGTCTGCCC
CGTGAGTTTG AAAGCATGGA GGACATTGAC CGGACCCGGG CTGTGCTGGA CGAGATCATG
ACCATCGACG GGCTTCTGAA AAAGGCAGAT GTTGATCCTG CCCCGGTGTC CGGCACTGTA
TTGACCGCCA CCAACCTGGT GCTGACCCTG TGGGCGCGAA GCGTGCTGGA CCTGCCCGAG
ACTGTTGAGT TTATTCCCGT AAACCAGTTT GGCCCTTTTC TTTCCGGGCT TTTCAAAAAG
GCTGAGGGCA AAGAAGACGG CCGCATTCAA GACGACAAAA AAGAGTCGTT TCTGCAATGG
CTTTCAGGCC GCACCGGCGT GGAGCCTCAT GATATATCGG CGCAAGCCGG CCATGTTCTG
GAACGAATGT TTGCCGAAGC AGAGGCGGAG CTGGGAGCAG TTGCCCCGAA GGACCTGGAC
CCGAAGTTTG TCCAGGTATT TCTGGTAAGC TAG
|
|---|
| Protein sequence | MTRQPAIIKE KLAAVAAQRQ KALSLPAKEA MDLILGSPDA PAIVHSMADQ DFYFLVNDIG
PEDALELLAL GSGSQWEHIT DIECWHKDRI SGPEMLRWFD LLMRADKNRF VQWMAADKHE
LLELLLYYTT QASAREHDQE PSEFDESFFT FDDVFYVRFT KRWPQDPDLP ETLEADHEKM
LYAFLKHLAE IDFIAYRDLL FYTANVLPTE AEEEVFRQRS IRLAEKGLLP FDEAVGIYQP
LPQGRKPVKK PARRPAKRSR LPVPVVHHRL LKKTTLFAQA LERVDSPAAL EELSTEFAAL
CNSIVVADGA RLSAKKELAH VVNKACGYIA IGLFRLAESK ETLNPSKAAA LMTTHALGDI
FRSGYGAAME IKRTADRWHS TSWCSAKQLP VSFWGEERAG ILAGLLIKRP LFFDAQTGLP
REFESMEDID RTRAVLDEIM TIDGLLKKAD VDPAPVSGTV LTATNLVLTL WARSVLDLPE
TVEFIPVNQF GPFLSGLFKK AEGKEDGRIQ DDKKESFLQW LSGRTGVEPH DISAQAGHVL
ERMFAEAEAE LGAVAPKDLD PKFVQVFLVS
|
|---|
| |