Gene Dole_0164 details

Gene Information

• Locus tag: Dole_0164
• ID: 5692981
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 182182
• End bp: 184158
• Gene Length: 1977 bp
• Protein Length: 658 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 641262743
• Product: AMP-dependent synthetase and ligase
• Protein accession: YP_001528051
• Protein GI: 158520181
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG1022] Long-chain acyl-CoA synthetases (AMP-forming)

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAAATA TCGATTATTT TAATCTGCCT TGGAAAGACC AGTGGGAGTG GGAAAGGGTT 
AATTTGCCGA CATTAACCCG GAAATTTCTT GAAAACGCCA AAAAGCACGC CAATAAGGAT 
TTTCAGCGGT TTAATGCCGC ACTCTATAAT GGTGACAGCA ACGGTAAAAT GACATGGGCA 
GAGACTGCCG CCAGAGTGGA AAACTATGCC TGCGGGTTAA TGAGCCTGGG GCTCGGGAAG 
CAGGAAATGG TGGGACTGAT GTCCGCAAGC GGCCCCTACT GGACCCATGC CGACCTTGCG 
CTTGCCTGCG CAAATGGTGT CAGTGTCGCC ATATACCCGA CCCTGTCATT TAAGGAAGCA 
TCGTATGTCG TCAACGATTC AGGGAGCAAA TTCCTTTTTC TAAGGGGCGA CACCATTCTT 
GAAATGATGC TCAACGGCTT TGACCATATG CCCGGGCTCG AAAAGATAAT CGTTATGGAC 
AGGGAATACA AGAGCAGCGA TGCGAGAGTT ATCAGCATGG GCGATCTTGA AAAAGCCGGC 
ATCGAGTGGA AAAAAGACAG CAATCATTTT GACGCTTATG TGGCAAGAAG AGATGGGGTT 
TCTCTTGATG ACATCTACAC GATTCTCTAC ACTTCAGGCA CAACCGGCCG GGGTAAAGGT 
GTTGTTCTTA CGCACCACAA CTGCTCAGCC AGAATGAACG GTGTAAATGA ATTCTTTGAT 
TACTGCGGCA TGGGGTTCAA GACGGAATAT ACAACCCTCT GCTTTCTTCC CCTCGCGCAT 
ATTTTCGACA GGGGATCATG CCAGGGCGTT GCCATTTTCA ACGGCTGCAC AATTGCCTAC 
GCGGACGCTC CGGGAACGCT TTTAGAAGAC CTTCAGAAAT ACAACCCCCA CTGGATCAAC 
TGTGTGCCAC GGCTTTATGA AAAAATATAT ATTCAGCTGC AGGAGAAAAT GGGGCAAAGC 
GGCCCGAAAC GAAAACTTTT TAACTGGGCG CTTAAGGTCG GCGAAGCGGT TTTCATGCAG 
CGGTATGATG CTGAAACAGG CACTTATAAT ATGGGGCATG ATTTTGATAT TACCGGCAAT 
CTTTCGTTTG GAATGAGAAT AAAGTATAAA ATTGCCGACA AGCTGTTCTC AAAGGTCAGG 
GCACTGTTTG GTAAAAACTT TAAGCATTCT TTTTCAGCCA GTGCATCAAT TTCCCCCGAG 
CTGCTAAAAT TTTTCTATAT CATTGGAATC AGAGTAAGCG AAGGTTACGG ATCAACCGAA 
AGTTTTAACG CCTGTTCAAA CATGCCCCTT GTGGCCTGCA AACCCGGATC TATCGGTCTT 
GAGTCAAATG GAAGCAGGCT CAGGGTGTCA GGCATAGGTG AGCTTGAGAT CTCCGGCGCC 
GGTATTTTTA AAAGATACTG GAATAAGCCC CAGGAGACGG CCGAATCCTT CACTGCTGAC 
GGATGGTTTA AAACAGGGGA CAAGGTTGAG GTTGACAGGT TCGGTTATTA TAAAATTGTT 
GACCGCATTA AAAATATTAT CTGTCTTTCC AACGGAAAGA ATATCGCCCC GGCAAAAATT 
GAAGCGCTTT TTACCACAAG CCCATATATT GAGCAGCTTT TTGTTGTTGG TGATGAACGG 
GCCGTAATAA GCACACTGTT GGTCCCAAGC CTTACATACT TTAAAGACAG GTTTGACAAA 
GAAGGTGTTG AATACGATAA CAGTCAGGTT GTTATAGATA CGTCAGCGGG GACCCCGATT 
GTAGTGAAGG TCGGTCCGGA TTTTATCGAA AAAGGAAACA TCAAAGGCCT TATTGCTGAA 
GAGGTTGCAA GAGCAAACAA GGAACTGGAA GGGTTTGAGA AGATAAAACA GTACACCATT 
CTCCGTGAAA GATTCACAGA GCAAAACGGC ATGCTGACAC CTACGCAGAA AACAAAGAAG 
AGGGTGATTC TTGACACGTA TGCAGCTGAA ATCGAAAAAA TGTATGCTCG GAAATAA 

 

Protein sequence

MTNIDYFNLP WKDQWEWERV NLPTLTRKFL ENAKKHANKD FQRFNAALYN GDSNGKMTWA 
ETAARVENYA CGLMSLGLGK QEMVGLMSAS GPYWTHADLA LACANGVSVA IYPTLSFKEA 
SYVVNDSGSK FLFLRGDTIL EMMLNGFDHM PGLEKIIVMD REYKSSDARV ISMGDLEKAG 
IEWKKDSNHF DAYVARRDGV SLDDIYTILY TSGTTGRGKG VVLTHHNCSA RMNGVNEFFD 
YCGMGFKTEY TTLCFLPLAH IFDRGSCQGV AIFNGCTIAY ADAPGTLLED LQKYNPHWIN 
CVPRLYEKIY IQLQEKMGQS GPKRKLFNWA LKVGEAVFMQ RYDAETGTYN MGHDFDITGN 
LSFGMRIKYK IADKLFSKVR ALFGKNFKHS FSASASISPE LLKFFYIIGI RVSEGYGSTE 
SFNACSNMPL VACKPGSIGL ESNGSRLRVS GIGELEISGA GIFKRYWNKP QETAESFTAD 
GWFKTGDKVE VDRFGYYKIV DRIKNIICLS NGKNIAPAKI EALFTTSPYI EQLFVVGDER 
AVISTLLVPS LTYFKDRFDK EGVEYDNSQV VIDTSAGTPI VVKVGPDFIE KGNIKGLIAE 
EVARANKELE GFEKIKQYTI LRERFTEQNG MLTPTQKTKK RVILDTYAAE IEKMYARK