Gene Franean1_6876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6876 
Symbol 
ID5675189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8379333 
End bp8379779 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content70% 
IMG OID641245725 
Productnitrogen fixation protein NifX 
Protein accessionYP_001511116 
Protein GI158318608 
COG category 
COG ID 
TIGRFAM ID[TIGR02663] nitrogen fixation protein NifX 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.268079 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAGA TCGCTTTTGC GACGAGCGAC GGCCACGCCG TGGACCAGCA CTTCGGCTGG 
TGCCGCCGGT TCGACGTCTA CGAGGTCGGG CCCGAGGGCT TCCACCTGTT CGAGACCAGA
GAGCTCGGGC CCGCGGAGGA CGACGAAGAG GACAAGATCG CCTCGAGGCT CGCGGCGGTC
GTCGACTGCG CGATCCTCAA CGTCTGCGAC ATCGGAGGGA CGGCGGCGGC GAAGGTCGTC
AAGGCCCGGA TCCACCCGAT GAAGGTCCCC GTGGGTACCG AGATCGACGC CCTGCTCGCC
AAGTTCGTCG GCGTGCTCGC GGGCAACCCG CCGCCCTGGC TGCGCAAGGT CCTGCGGGCG
CACAGCCCGC AGGTGGCCCC CGCCTGGACC CCGACCTCCG CGGACCCCGC CACCTCGACC
CCGATGACCA TGGGAGGAAC GGCATGA
 
Protein sequence
MLKIAFATSD GHAVDQHFGW CRRFDVYEVG PEGFHLFETR ELGPAEDDEE DKIASRLAAV 
VDCAILNVCD IGGTAAAKVV KARIHPMKVP VGTEIDALLA KFVGVLAGNP PPWLRKVLRA
HSPQVAPAWT PTSADPATST PMTMGGTA