| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6196 |
|---|
| Symbol | |
|---|
| ID | 5674517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 7528409 |
|---|
| End bp | 7529578 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641245048 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001510446 |
|---|
| Protein GI | 158317938 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0286136 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGACG TGCTCCCCGA CCTCGAGAGC TGGTGGCAGA CGGGGGAGAC CGTCGGCCTG
GCGACGGTCG TCGGCACCTG GAAGTCGGCC CCGCGCCAGC CGGGTGCGGC GATGGCTGTC
ACCCCGGACG GCTCGGTCGT GGGCAGTGTC TCGGGCGGCT GCGTCGAGGG GGCCGTGTAC
GACCTGGCCG AGCAGTGCCG CGCGACGTCC GTCCCCGTCC TGCAGCGCTA CGGGGTCAGT
GACGACGACG CGTTCGCGGT GGGCCTCACC TGCGGGGGCA TCATCGACGT CTTCGTCGAG
GCGGTGAGCC GGCGGACGTT CCCCGAGCTC GGCGGGATCC TCGCCGACGT CCGGGACGGC
CGGCCGGTCG CGGTCGCGAC GCTGGTCAGC GGGGTGGGCA CCAGCCCCGT CGGGTCCCGC
CTAGTCGTCC GGCCGGGCTC CGTCGAGGGC ACCCTCGGCA GCGCGCGGTT CGACACGGCC
GTCCGCGACG ACGCGCGCGG GATGCTGGAG CAGGGCCGGA CGGGCATCGT CCGCTACGGC
CCGGACGGCG AGCGGCGCGG TGACGACAGT GCCGTCTTTG TCGCCTCCTA CGCGCCGCGG
CCGCGGCTGA TCGTCTTCGG TGCCATCGAC TTCGCCGCCG CGCTGGCCAG GGTGGGCGCC
TTCCTCGGCT ACCGGGTGAC CGTGTGCGAC GCACGGGCGA CGTTCGCCAC CAGCAAGCGG
TTCCCCGAGG CCGACGAGGT GGTCGTCGAC TGGCCGCACC GCTACCTCGC CGCGACGGCG
GTGGACGAGC GCACGACCGT CTGCGTCCTC ACCCACGATC CGAAGTTCGA CGTGCCGCTC
CTGGAGGTCG CGCTGCGCCG GCCGCTGGCC TACCTCGGCG TCATGGGCTC GCGCCGCACC
AACGCCGACC GCGCGCGGCG GCTGCGGGAG CTCGGCTTCT CCGACGCCGA CCTGGCCCGC
CTGCACGCGC CCATCGGCCT GGACATCGGG GGGCGCACAC CGGAGGAGAC CGCGATCTCC
ATCGCCGCGG AGATCATCGC GACGCGGCAC GGGGGATCGG GCGCCCAGCT ACGGCAGCTG
TCCGGCCCCA TCCACCATGA CCTGCCCGCG CCGTTCGGTA ACCCATCCGC TTCGTTCGGT
GACGTTCGGG CGTCGGCCCA TGACGGCTGA
|
|---|
| Protein sequence | MRDVLPDLES WWQTGETVGL ATVVGTWKSA PRQPGAAMAV TPDGSVVGSV SGGCVEGAVY
DLAEQCRATS VPVLQRYGVS DDDAFAVGLT CGGIIDVFVE AVSRRTFPEL GGILADVRDG
RPVAVATLVS GVGTSPVGSR LVVRPGSVEG TLGSARFDTA VRDDARGMLE QGRTGIVRYG
PDGERRGDDS AVFVASYAPR PRLIVFGAID FAAALARVGA FLGYRVTVCD ARATFATSKR
FPEADEVVVD WPHRYLAATA VDERTTVCVL THDPKFDVPL LEVALRRPLA YLGVMGSRRT
NADRARRLRE LGFSDADLAR LHAPIGLDIG GRTPEETAIS IAAEIIATRH GGSGAQLRQL
SGPIHHDLPA PFGNPSASFG DVRASAHDG
|
|---|
| |