| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5950 |
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| Symbol | |
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| ID | 5674271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7254946 |
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| End bp | 7257195 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641244798 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_001510200 |
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| Protein GI | 158317692 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0569292 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGATC AGGCGACGGT CAGCGGGACG CTGCGCGATC GGGCGGAGGA GCTGCTCCGG
GCTCTGGCTG GGCCGGGCGC GGTCCTGCGT GACGACCAGT GGCAGGCGAT CGACGCGCTC
GTCAGCGGGC GGCGGCGGGT GCTGCTCGTC CAGCGCACGG GCTGGGGGAA GTCCGCGGTG
TACTTCCTCG CCACGGCGCT GCTACGCGGT CTCGGCGACT CGGATCCGGG TGACTCGGAT
CCGGGTGACT CGGAACCAGG TGACTCGGAA CCAGGTGACT CGGGTTCAAG CGGTCCGAGG
CCGGGCGGCG GTCCGGCCGC CCAGGTGGGG CCCACGGTGA TCGTCTCCCC GCTGCTGGCG
CTGATCCGCA ACCAGGCGGC CGCGGCGGCA CGGGTGGGCA TCCGGGCCGG GGAGATCCAT
TCGGGGAACC TCACCGAGTG GGACGAGGTC TACGCCGCGC TGCGGGCGGG GGAGCTGGAC
CTGCTGCTCG TCGGCCCGGA GCGGCTGAAC AACCCGACCT TCCGCGATGA GTACCTCCCG
GAGCTCGCGG CCACGACGGG GCTGCTTGTC GTCGACGAGG CGCACTGCAT CTCCGACTGG
GGCCACGACT TCCGTCCGGA CTACCGCCGG CTGCGGTCAC TGATCGGCGG GCTGCGGCCG
GATGTGCCCG TGCTCGCGAC GACCGCCACG GCCAACGCGC GGGTGGTCGA GGACGTCAGC
GAGCAGCTCG GGGCCGGCTC CACGAGCGCG GAGACCGTGG TCCTGCGGGG GTCTCTCGAC
CGGGAGAGCC TCCGGCTGGC GGTTGTGTCG CTTCCCGCGG CCGAGCAGCG GTTCGGCTGG
CTGGCCGACC ATCTCGCAGA GCTACCCGGC TCCGGGATCA TCTACACGCT CACCAAGCCG
GGCGCGGAGG AGCTGACCGC GTTCCTTCGC GGCCAGGGCC ACGAGGTGAC GACCTACCAC
GGCGGCACGG AGCCGGCCGA GCGCATCGCC GCCGAGGAGG ACCTGCTCGG CAACCGGGTG
AAGGCGCTGG TGGCGACGAG CGCTCTCGGG ATGGGCTTCG ACAAGCCCGA TCTCGGGTTC
GTCGTCCACG TCGGTGCGCC GAACTCGCCG ATCGCCTACT ACCAGCAGAT CGGGCGGGCC
GGGCGTGCGG TGGAGTCCGC CGAGGTCGTC CTGCTGCCCG CCACCGAGGA CCGTGACATC
TGGCGGTACT TCGCCGACAC GTCGTTCCCC CCGGAGCCGG TCGCCCGGCA GGTGCTGGAC
GTCCTGGCCC AGGCCGGGCG GACGATGTCG ACGCAGGCAC TGCTCGCCGC CGTCGACCTG
GGGCACTCCC GGCTCGAGCA GATGTTGAAG GTGCTCGACG CGGACGGCGT CGTCCGGCGG
GTCAAGGGCG GCTGGGAGGC GACGGGCGAG CCGTGGGTCT ACGACGCCGA GCGCTTCCGT
CGCGTCGCCG CCGCGCGGGC CCGCGAGCAG CGGGCGATGC TCGACTACAT CGCGACGCCG
TCCTGCCGGA TGGAGTTCCT GCGCCACGCG CTCGACGATC CGTACGCGGT GCCGTGCGGC
CGGTGTGACC GGTGCACCGG TCGGGTGTGG TCCACCGAGG TCTCCTCCCG GTCGAGGGAC
AGCGCCCGCG AGGAGCTGCG CCGGACGGGC GTGCCCGTTG AGCCGCGCCG GATGTGGCCG
ACGGGCATGC GCACGCTGGG GGTCGCCGCG TCCGGCCGGA TTCCCGCGTC GGTCACCGCC
GAGCCCGGCC GCGTGGTCGC ACGGCTCAAC GACCTGGGCT GGGGCAACCG GCTGCGCCAG
CTGTTCGCCC CTCCTCCCGA GGCCCAGGAC GGCCCTGTCC CCGACGACCT GTTCGAGGCG
GTGGTGCGGA CCCTGACCGA ATGGCGGTGG GAGCGGCGCC CGGCGGCCGT GGTGACTGTG
GCGTCCAGGA CACGCCCGTG CCTGGTGGCG GACCTCGGTG AACGGATCGC GGGTGTCGGG
CGGCTGCCGT TGCTGGGGCA GCTCCCCCGA GTGGCCGGCG GGCCCGCGGC CGGCCGGGTG
CATAACAGCG CCCACCGCCT CGCCGGCCTG TGGTCGGCCT TCGAGGTGCC ACCGCCTATC
GCCGGCCCGC TCGCCGAGCT GACCGGGCCG GTGCTGCTCG TCGACGACCT GATCGTCACG
GGCTGGACGA TGACCGTCGC GGCCAGGGCG CTGCGCCAGG CCGGCGCGCC GGGCGTGCTG
CCGTTCGCCC TCGCCGTCGA GACCGGCTGA
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| Protein sequence | MADQATVSGT LRDRAEELLR ALAGPGAVLR DDQWQAIDAL VSGRRRVLLV QRTGWGKSAV
YFLATALLRG LGDSDPGDSD PGDSEPGDSE PGDSGSSGPR PGGGPAAQVG PTVIVSPLLA
LIRNQAAAAA RVGIRAGEIH SGNLTEWDEV YAALRAGELD LLLVGPERLN NPTFRDEYLP
ELAATTGLLV VDEAHCISDW GHDFRPDYRR LRSLIGGLRP DVPVLATTAT ANARVVEDVS
EQLGAGSTSA ETVVLRGSLD RESLRLAVVS LPAAEQRFGW LADHLAELPG SGIIYTLTKP
GAEELTAFLR GQGHEVTTYH GGTEPAERIA AEEDLLGNRV KALVATSALG MGFDKPDLGF
VVHVGAPNSP IAYYQQIGRA GRAVESAEVV LLPATEDRDI WRYFADTSFP PEPVARQVLD
VLAQAGRTMS TQALLAAVDL GHSRLEQMLK VLDADGVVRR VKGGWEATGE PWVYDAERFR
RVAAARAREQ RAMLDYIATP SCRMEFLRHA LDDPYAVPCG RCDRCTGRVW STEVSSRSRD
SAREELRRTG VPVEPRRMWP TGMRTLGVAA SGRIPASVTA EPGRVVARLN DLGWGNRLRQ
LFAPPPEAQD GPVPDDLFEA VVRTLTEWRW ERRPAAVVTV ASRTRPCLVA DLGERIAGVG
RLPLLGQLPR VAGGPAAGRV HNSAHRLAGL WSAFEVPPPI AGPLAELTGP VLLVDDLIVT
GWTMTVAARA LRQAGAPGVL PFALAVETG
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