| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4980 |
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| Symbol | |
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| ID | 5673319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5975058 |
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| End bp | 5976953 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641243834 |
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| Product | GAF sensor signal transduction histidine kinase |
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| Protein accession | YP_001509250 |
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| Protein GI | 158316742 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.691708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.877049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCAGA CCGGCGCCGG CCCAGATGCG CCGGCGACCA GCAGCGCCGA GCCGCGGACG
CTCGGCGGCG CCGGCCGTCG CCTCAAGCCC GGGCCGAGGT CGGAGGTCTA CGCGGTGCAG
AGCCGGATGC GCGGCCTGCT CGACGCCGTG GTCGATGTCG CGCGCGAGCT GAGCCTGCCA
GTGACGCTAC GCCGGATCGC GCAGGCGGCC CGCTCCCTGG TGGACTGCGA GCTCGGCGCG
CTCGGGGTCC TCGGCCAGGA CGGCGCCATC ACCGAGCTGA TCGCGGTCGG CCCGGGGGAG
GAGGTTCCCC GCGACATCGC CCGGATGCCG CCCGGCCGCG GCCTGATCGG CGAGCCCGGG
GGCGGCCCCC ACCCGGGCGG GAACGCACCG CGGGTGGGCA CCGCCGTCGT CGCGCCGGAG
ACGCTCGGCT TCCCGCCCGG CCGGCCTCGT TTCACCACGT TCCTCAACGT CCCGATCGCC
GTCCGCGGGG AGGCGTTCGG CAACCTGTAC CTGGTGGGCA AGCGCGGCCC CGAGTTCACC
CAGGAGGACG AGGACCTGGT CGAGGCGCTC GCCGCGGCCG TCGGCTTCGC CATCGAGAAC
GCCCGCCTTT ACGAGGCCAC CCGGCGGCGC CAGGCCTGGC TCACCGCGAG TGCCGAGATC
ACCACGGCGC TGCTGTCGGT GGCCGAGCCC GTCGACGCGT TACGGCTGGT CGCCCGGCGT
GCCAGGCAGA TCACCTCGGC CCTGCTCGCC GCGATCGTGC TCCCGGTGAA CAGCGCGGAG
GCGGCCCGGC CCGGCCGCTT CGGCGTCCGG CCCCGCCGGC CCGCCGCGCG GGCCGGCGGG
GCCCCGAGGT CGCTGGAGGT GGCCGTCGTC GACGGTCCGC TCGCCGAGCA GTTGCGGGGG
CGGATGCTGC CCGAGCGGGT CGGGCTGTTC AAGATCATGA AGGCGGGCCG GGCGGTGCTC
GTCCCCGCCG AGCGCGCCGA TCCCGCCGCG CACAGCCTGC TGGGCGAGGC CGTCGACGGC
CTGGTGATCG GCACCGTGAT GGTCATCCCG CTGTTGGCCG CCGGGCGGCC GCTGGGGGTG
CTCATGCTCA CCGCGGCCCC GGGCGCGGTC CCGTTCGGCC AGCTCGACCT GGAGATGGCG
GCGGCGTTCG CCGGTCAGGC CGCGCTCGCC CTGGAACTCG CCCGCGTGCA GTGGGACAGG
GAACGCCTCG CGGTGTTCGA GGAACGCGAC CGCATCGCCC GCGACCTGCA CGACGTCGTC
ATCCAGCGGC TGTTCGCCAC CGGTCTGCAG ATGCAGGGCC TCGCCCGGGT GATCGACGAG
GGCGCCGCGG TGCGGCTCAA CGACGCCGTC CGCGAGCTGG ATCAGACGAT CGCCGACATC
CGCCATACGA TTTTCTCGCT GACGGCGTCC GCCGGCGCCG TCGACCTGCG GGCCGAGATC
GCCGGAATCG TGTCACAGGC CGAGCAGGCG CTGGGCATCC GGCCCACGGC CCGCATCGAC
GGCCCGGTCG ACCGCGGTAT CCCGGAGGTG ATCCATCCGC ACCTGCTGGC GGCCATCCGT
GAGGCGCTGT CGAACATCGC ACGGCATGCC CGGGCGACCC GCATCGAGGT GCTGGTGCGG
GTCACCAACA CCGACGTCTC GGTGCAGGTG CGCGACGACG GCTGCGGCCC GGGTGGCGCG
TCGCGCAGCA GCGGCCTGAC GAACCTGCGC CGCCGGGCGC TCGACCTCGG CGGCCGGATG
GAGTTCGGCC CAGGCGAAGA CGGCATCGGC ACGACGGTGA CCTGGTACGT GCCGCTGGTT
CAGCCCATCC CGCCACCGCG CGCGCTGCCG CGGGCCGGGG ACACCCCCGC CCCGCGACTC
GGCGTCGGGC CCGCGGAGGG GCCTGGTGGG CCCTGA
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| Protein sequence | MVQTGAGPDA PATSSAEPRT LGGAGRRLKP GPRSEVYAVQ SRMRGLLDAV VDVARELSLP
VTLRRIAQAA RSLVDCELGA LGVLGQDGAI TELIAVGPGE EVPRDIARMP PGRGLIGEPG
GGPHPGGNAP RVGTAVVAPE TLGFPPGRPR FTTFLNVPIA VRGEAFGNLY LVGKRGPEFT
QEDEDLVEAL AAAVGFAIEN ARLYEATRRR QAWLTASAEI TTALLSVAEP VDALRLVARR
ARQITSALLA AIVLPVNSAE AARPGRFGVR PRRPAARAGG APRSLEVAVV DGPLAEQLRG
RMLPERVGLF KIMKAGRAVL VPAERADPAA HSLLGEAVDG LVIGTVMVIP LLAAGRPLGV
LMLTAAPGAV PFGQLDLEMA AAFAGQAALA LELARVQWDR ERLAVFEERD RIARDLHDVV
IQRLFATGLQ MQGLARVIDE GAAVRLNDAV RELDQTIADI RHTIFSLTAS AGAVDLRAEI
AGIVSQAEQA LGIRPTARID GPVDRGIPEV IHPHLLAAIR EALSNIARHA RATRIEVLVR
VTNTDVSVQV RDDGCGPGGA SRSSGLTNLR RRALDLGGRM EFGPGEDGIG TTVTWYVPLV
QPIPPPRALP RAGDTPAPRL GVGPAEGPGG P
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