| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4919 |
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| Symbol | |
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| ID | 5673259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5906546 |
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| End bp | 5907256 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641243774 |
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| Product | endopeptidase Clp |
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| Protein accession | YP_001509190 |
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| Protein GI | 158316682 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.438524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00520198 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATGCCC TGTATCAGCC GCGACACAGC CGGTCACACC GCCCACGCAC CGGCACCGGC
ATCGGCGCCG GCCAGTACGG CGAGGCCCCG GGGACGGCGG CCGGCCCGTT CGAGGACCAG
GTGTTCCACC GGCTCCTCCA GAACCGGATC GTCTTCCTCG GCTCGGTGGT CGAGGACACC
ATCGCCAACG CGATCTGCGC GAAGCTGCTT CTTCTCGCCA GTGACGATCC GTCCGCGGAC
ATTCACCTGT ACATCAATTC GCCGGGTGGG TCGGTCAGCG CGGGAATGGC CATCTACGAC
ACAATGCAGT ACATCGCGAA CGACGTGGCG ACCGTCGCAC TGGGATTCGC CGGGTCGATG
GGTCAGTTCC TGCTCTCCTC CGGGGCGCCC GGAAAGCGGT TCGCACTGCC CCATTCCCGG
GTGATGATGC ACCAGCCGTC CGGTGGGATC GGCGGGACCG CGACCGACAT CGCGATCCAG
GCGGAGCAGC TCCTGTTCAC CAAGCGGCTG ATCCAGGAAC GCATCGCCGA GCACACCGGA
CAGCCCGTCG AGCGGATCGA GGCGGATTCC GACCGTGACC GCTGGTTCAC CGCCGAGGAG
GCCCGGGACT ACGGCCTGGT CGACCGGGTG ATCACTCGGG TCGACCAGGT CACCCCGGAC
GCGAACAGCC GGGCAGCCGG TGGCGGTGAC AGCCGGGTGG CCCTCCGATG A
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| Protein sequence | MNALYQPRHS RSHRPRTGTG IGAGQYGEAP GTAAGPFEDQ VFHRLLQNRI VFLGSVVEDT
IANAICAKLL LLASDDPSAD IHLYINSPGG SVSAGMAIYD TMQYIANDVA TVALGFAGSM
GQFLLSSGAP GKRFALPHSR VMMHQPSGGI GGTATDIAIQ AEQLLFTKRL IQERIAEHTG
QPVERIEADS DRDRWFTAEE ARDYGLVDRV ITRVDQVTPD ANSRAAGGGD SRVALR
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