| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4867 |
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| Symbol | |
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| ID | 5673207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5839016 |
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| End bp | 5841988 |
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| Gene Length | 2973 bp |
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| Protein Length | 990 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641243722 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001509138 |
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| Protein GI | 158316630 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4581] Superfamily II RNA helicase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.335008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCTCCG CGCCCGGAGC CGTCGAGGAG TTCGCGGCCC GGTACCCGTT CGGGCTCGAC
CCGTTCCAGT CCGAGGCAGT CGCGGCGCTC GCGCAGGGCG AGGGTGTCCT CGTCGCCGCC
CCGACGGGCG CCGGCAAGAC CGTCGTGGGT GAGTTCGCCG CCCACCTGGC GCTCGCGACC
GGCACACGTT GCTTCTACAC CACCCCGATC AAGGCCCTGT CCAACCAGAA GTACGCCGAC
CTGGTCGCCC GGTACGGCGC GGCCTCGATC GGCCTGCTGA CTGGCGACAC CTCGCGCAAC
GGGGACGCTC CGGTGGTCGT GATGACCACC GAGGTCCTGC GCAACATGCT CTACACCGAG
GCCGCGGGCA GCGCCCGGCT GGACTCCCTC GGCTACGTCG TGATGGACGA GGTCCACTAC
CTCGCCGATC GCCAGCGCGG AGCCGTCTGG GAAGAGGTGA TCATTCACCT GCCCCAGCAC
GTGCGGCTCG TCTCGCTGTC GGCGACGGTC AGCAACGCGG AGGAGTTCGC CGAGTGGCTG
GTCACCGTCC GCGGGCACAC CCGGGTGATC GTCAGTGAGC ACCGCCCGGT GCCGCTGTTC
CAGCACGTCC TCGCGGACCG GACGCTGCAC GACCTGTTCG TCGACCAGCC GTCCGGGCTG
GATCCGGGCG TCCCGGCGTT CTCGCGTCGC GGCCCGGGGC CGAACGGGCG GGGCGCTGCC
CCAGGGTCCG TCGGGGGCGC CACCCCGGGC AGCCGGCCCG GCGCCCGTGC CGCTGAAGCC
CGTGCCGGTG ATATCGCCGG TGCTGGTGCG GCGGCCGGGG GGCGGGCGGT CAACCCGGAC
CTGCTCCGGC TCGCCCGGGA GGAGTCCCGC GCGGTGTACG AGCGCGGCCG CGGGCCCCGG
TCGTCGCGGC CGGGCCGGCC CGGCGCCGGG AACGGGGCCG GGAACGGGCG GCGCCGCTCC
GGGCCGCCGA ACCGGCCCGA CGTCATCGTC CGGCTGGACC GTGCCGGCCT GCTGCCCGCG
ATCCTGTTCG TCTTCAGCCG GGTCGGCTGC GACGCCGCGG TGGCGTCCTG CATCCAGGCG
GGTCTGCGGC TGACGTCCCC CGACGAGCAG CGCGAGATCC GGGAACACGT CCGGGCCCGG
ACAGCGGGAG TGCCCCAGGC CGACCTAGCC GTCCTGGGCT ACTGGCAGTG GCTCGAAGGG
CTGGAGCGGG GTATCGCCGC GCACCACGCA GGCATGCTCC CCACCTTCAA GGAGGTGGTG
GAGGAGCTGT TCGTGCGTGG GCTCGTCCGC GCGGTGTTCG CCACCGAGAC CCTGGCGCTC
GGGATCAACA TGCCCGCGCG CACCGTCGTC CTGGAACGGC TCACCAAGTT CAACGGCCAG
ACCCGCGCGG ACATCACGCC CGGCGAGTAC ACGCAGCTCA CCGGGCGGGC CGGGCGGCGC
GGGATCGACG TCGAGGGCCA CGCCGTCGTG CTGTGGCAGC CCGGGCTGGA CCCGCTCGCC
CTCGCCGGCC TGGCCTCGAC CCGGACCTAT CCGCTGAAGT CGTCGTTCCG GCCGTCCTAC
AACATGGCTG TCAACCTCGT CGGCCGCCTC GGCGCCGAGC GCGCGCGCAC CGTCCTGGAG
TCGTCGTTCG CCCAGTTCCA GGCGGACAAG GCCGTCGTCG GCATCGCCCG CGCGGTGCGC
CGTAACCAGA CGGCGATCGA GGAGCTGACC GCCGCCCTCG AATGCGACCG CGGCTCGGTC
ACCGAGTACG ACGGGCTGCG CCGCCAGATC CGGGAGCGCG AGGCCGACCT GTCCCGCGCG
GGGACGGTGC GCCGCCAGTC CGAGGTCGCC GCGGCGCTGG CGAAGCTGCG CAGCGGCGAC
GTGGTGCGCG TGCCGGTCGG GCGGCGCGGC GGGCTTGTCG TGGTGCTCGA CGCCGGTGTC
GACGGGGGCT CGGCGGAAGG GCCGCGCCCC GTCGTCCTCA CCGAGGACCG CCAGGTCCGG
CGCCTGTCCA TGATTGATTT TCCGGTGGCC GTCGAGCCGC TGGCCCGGGT CCGTATCCCG
AAGTCGTTCA ACCCCCGCTC GCCGCAGGCG CGCCGCGACC TCGCCTCGTC GCTGCGCAAC
ATCCGGCTGC CGGAGGAGCC CGGCCGCCGC GAGCGGGCGC GTTCGCTGGC CGCGGACGAC
GCCGAGCTGG CCCGGCTGCG CCGCGCGATG CGGGCCCATC CCGTCCACGA CTGCCCGGAG
CGGGAGGCGC ACCTGCGCTC GGCGGAACGC ATCGACCGCC TGCGCCGCGA GACAGCCGGG
CTCGAGCGCA AGGTCGAGGG GCGGACGAAC ACGGTGGCCC GGACCTTCGA CCGGGTCCGC
GACACGCTCG CCGAGCTCGG TTACCTGGCC GTCGGCGGCG ACTCCGTCAC CGACGCGGGC
GCGATGCTGG CGCGCATCTA CACCGAGCAG GACCTGCAGG TCGCGGAATG CCTGCGCACG
GGAGTGTGGG AGGGGCTGAC CCCACCCGCG CTGGCCGCCG CGGTCTCGAC GCTGGTCTTC
GAGCCACGCG GTGACGACAT CGCCGCGCCG ACGATCCCCG GTGGGGGCGC GCTGCGCGAC
GCGCTCGCGG ACATGGCGGG TGTCTACACC CGGCTGGGCG CCGCGGAGGA CCATCACCGG
CTCGGGTTCC TGCGCCCGCC CGACCTCGGC TTCGTCGCGG TCGCGCACGG CTGGGCCTGC
GGGCGCGGGC TGGAGAAGGT CCTCGAGGAC GCCGGCGCGG ACCTGACGGC CGGGGACTTC
GTCCGCTGGA TGCGCCAGCT CATCGACCTG CTGGACCAGA TCGCGCAGGT CGCCCCGGTC
TACGCGGCGA AGACGTCCGC CGGGCCGGCC TCGGGTGGGC CCACGGCGCA GGAGCGCGCC
GGCACCGACG GGATCCTCGG CGTCGGCCGG GCCGCCCGGG CTGCGATAGA CGCGATCCGC
CGCGGCGTGG TCGCCTACTC GATGTCCGTG TGA
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| Protein sequence | MSSAPGAVEE FAARYPFGLD PFQSEAVAAL AQGEGVLVAA PTGAGKTVVG EFAAHLALAT
GTRCFYTTPI KALSNQKYAD LVARYGAASI GLLTGDTSRN GDAPVVVMTT EVLRNMLYTE
AAGSARLDSL GYVVMDEVHY LADRQRGAVW EEVIIHLPQH VRLVSLSATV SNAEEFAEWL
VTVRGHTRVI VSEHRPVPLF QHVLADRTLH DLFVDQPSGL DPGVPAFSRR GPGPNGRGAA
PGSVGGATPG SRPGARAAEA RAGDIAGAGA AAGGRAVNPD LLRLAREESR AVYERGRGPR
SSRPGRPGAG NGAGNGRRRS GPPNRPDVIV RLDRAGLLPA ILFVFSRVGC DAAVASCIQA
GLRLTSPDEQ REIREHVRAR TAGVPQADLA VLGYWQWLEG LERGIAAHHA GMLPTFKEVV
EELFVRGLVR AVFATETLAL GINMPARTVV LERLTKFNGQ TRADITPGEY TQLTGRAGRR
GIDVEGHAVV LWQPGLDPLA LAGLASTRTY PLKSSFRPSY NMAVNLVGRL GAERARTVLE
SSFAQFQADK AVVGIARAVR RNQTAIEELT AALECDRGSV TEYDGLRRQI REREADLSRA
GTVRRQSEVA AALAKLRSGD VVRVPVGRRG GLVVVLDAGV DGGSAEGPRP VVLTEDRQVR
RLSMIDFPVA VEPLARVRIP KSFNPRSPQA RRDLASSLRN IRLPEEPGRR ERARSLAADD
AELARLRRAM RAHPVHDCPE REAHLRSAER IDRLRRETAG LERKVEGRTN TVARTFDRVR
DTLAELGYLA VGGDSVTDAG AMLARIYTEQ DLQVAECLRT GVWEGLTPPA LAAAVSTLVF
EPRGDDIAAP TIPGGGALRD ALADMAGVYT RLGAAEDHHR LGFLRPPDLG FVAVAHGWAC
GRGLEKVLED AGADLTAGDF VRWMRQLIDL LDQIAQVAPV YAAKTSAGPA SGGPTAQERA
GTDGILGVGR AARAAIDAIR RGVVAYSMSV
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