Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4748 |
Symbol | |
ID | 5673090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 5670201 |
End bp | 5671088 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641243605 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001509021 |
Protein GI | 158316513 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.259792 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCGAGG GATGGGCCAG ACGCGTGTCG GAGTTCGAAA GCATCTGGAG TGACCTTCAA GGTGTCCCGT TCTCGCAGGG ATACCTGGAC GCCGCGGGCG TGCGGACGAG ATATCTGCAC GCCGGCGACA AGAGCCGACC GGTGCTCGTC CTGTTACATG GTTCGGGCGG GCATGCCGAG GCCTACGTCC GCAATCTGGA GGCCCACGCA CAACATTTCT CGACGTGGGC GATCGACATG CTCGGGCACG GGTACACCGG CCGGCCCGGT CACCCCCTGG AGGTCGCCCA CTACGTGGAG CACCTGATGG CGGTGCTCGA CACCATCGGC GCGGACCGCG CCCACATCAG CGGCGAGTCC CTCGGGGGCT GGGTCGCGGC CCGCACGGCC GTCGACCATC CGGACCGGGT CGATCGGCTG GTGCTCAACA CCGCCGGCGG GTCGCAGGCG GATCCGGCCG TCATGGCGCG TATCCGCACG CTGTCGATGG CGGCGGTGGA GGACCCGGCC TGGCCGGTCG TCCAGGCCCG GATCAAGTGG CTGATGGCGG ACAAGACCCG GGACTACGAC GACCTCGTCG CGAGCCGGCA GCGCGTCTAC CGGCAGTCCG GCTTCACCGC GGCGATGAGC GACATCATGG CGCTGCAGGA TCCGGCGATC AGGGCGCGTA ACCTGCTCGG CCCGGCCGAG TACGGCGCCA TCACCGCACC CACGCTGGTG CTGTGGACGA GCGACGACCC GACCGCGAAC GTCGCGGAGG GCAGCCGGAT CGCCTCGATG ATCCCGGGCG CCCGCTTCGA GGTGATGCCC GGCTGCGGCC ACTGGCCCCA GTACGAGGAC GCCAAGACCT TCAACCGCCT GCACGTCGAC TTCCTGCTGG GGCGCTGA
|
Protein sequence | MTEGWARRVS EFESIWSDLQ GVPFSQGYLD AAGVRTRYLH AGDKSRPVLV LLHGSGGHAE AYVRNLEAHA QHFSTWAIDM LGHGYTGRPG HPLEVAHYVE HLMAVLDTIG ADRAHISGES LGGWVAARTA VDHPDRVDRL VLNTAGGSQA DPAVMARIRT LSMAAVEDPA WPVVQARIKW LMADKTRDYD DLVASRQRVY RQSGFTAAMS DIMALQDPAI RARNLLGPAE YGAITAPTLV LWTSDDPTAN VAEGSRIASM IPGARFEVMP GCGHWPQYED AKTFNRLHVD FLLGR
|
| |