Gene Franean1_4748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4748 
Symbol 
ID5673090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5670201 
End bp5671088 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content70% 
IMG OID641243605 
Productalpha/beta hydrolase fold 
Protein accessionYP_001509021 
Protein GI158316513 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.259792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGG GATGGGCCAG ACGCGTGTCG GAGTTCGAAA GCATCTGGAG TGACCTTCAA 
GGTGTCCCGT TCTCGCAGGG ATACCTGGAC GCCGCGGGCG TGCGGACGAG ATATCTGCAC
GCCGGCGACA AGAGCCGACC GGTGCTCGTC CTGTTACATG GTTCGGGCGG GCATGCCGAG
GCCTACGTCC GCAATCTGGA GGCCCACGCA CAACATTTCT CGACGTGGGC GATCGACATG
CTCGGGCACG GGTACACCGG CCGGCCCGGT CACCCCCTGG AGGTCGCCCA CTACGTGGAG
CACCTGATGG CGGTGCTCGA CACCATCGGC GCGGACCGCG CCCACATCAG CGGCGAGTCC
CTCGGGGGCT GGGTCGCGGC CCGCACGGCC GTCGACCATC CGGACCGGGT CGATCGGCTG
GTGCTCAACA CCGCCGGCGG GTCGCAGGCG GATCCGGCCG TCATGGCGCG TATCCGCACG
CTGTCGATGG CGGCGGTGGA GGACCCGGCC TGGCCGGTCG TCCAGGCCCG GATCAAGTGG
CTGATGGCGG ACAAGACCCG GGACTACGAC GACCTCGTCG CGAGCCGGCA GCGCGTCTAC
CGGCAGTCCG GCTTCACCGC GGCGATGAGC GACATCATGG CGCTGCAGGA TCCGGCGATC
AGGGCGCGTA ACCTGCTCGG CCCGGCCGAG TACGGCGCCA TCACCGCACC CACGCTGGTG
CTGTGGACGA GCGACGACCC GACCGCGAAC GTCGCGGAGG GCAGCCGGAT CGCCTCGATG
ATCCCGGGCG CCCGCTTCGA GGTGATGCCC GGCTGCGGCC ACTGGCCCCA GTACGAGGAC
GCCAAGACCT TCAACCGCCT GCACGTCGAC TTCCTGCTGG GGCGCTGA
 
Protein sequence
MTEGWARRVS EFESIWSDLQ GVPFSQGYLD AAGVRTRYLH AGDKSRPVLV LLHGSGGHAE 
AYVRNLEAHA QHFSTWAIDM LGHGYTGRPG HPLEVAHYVE HLMAVLDTIG ADRAHISGES
LGGWVAARTA VDHPDRVDRL VLNTAGGSQA DPAVMARIRT LSMAAVEDPA WPVVQARIKW
LMADKTRDYD DLVASRQRVY RQSGFTAAMS DIMALQDPAI RARNLLGPAE YGAITAPTLV
LWTSDDPTAN VAEGSRIASM IPGARFEVMP GCGHWPQYED AKTFNRLHVD FLLGR