| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4633 |
|---|
| Symbol | |
|---|
| ID | 5672976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 5526534 |
|---|
| End bp | 5526995 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641243491 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001508907 |
|---|
| Protein GI | 158316399 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGGCG TGACCGATGT GACCGACGCG GATGTCTTCG CCGCGTTCCC CGCGGTGCTG
ATCGACCGCG ACAACATCGA GCATTACCGC GGGCTGCTCC AGCAGCGGCT GCTGATCAAT
CGTTGCTCGG CCTGCGGCTA CTGGGTGTAC CCACACCGCC CGCTGTGCCC GAAGTGCTGG
TCGTGGGACG TCGTGCCCAC CGAGGTGAGC GGCGAGGGCT CCGTGTTCCT GTGCACGCTG
ATCCACCAGG AGCGGGATCC GAACGCCGCA CTGTCGGAGC CGGTGCCGGC CGCCGCCGTG
GAGCTTGTCG AGCAGTCGGG GTTGCGTTAT CTGGCGCCGA TCGTGAACTG CCCGCTCGAG
GCGATCCGGC TCGACATGCC GGTGCGCCTG ACGTGGGTGG ATCGCGACGG GCTGGCGTGG
CCGGCGTTCG AACCGGCGGT CCCGATCGAG GACAGGAGAT AG
|
|---|
| Protein sequence | MTGVTDVTDA DVFAAFPAVL IDRDNIEHYR GLLQQRLLIN RCSACGYWVY PHRPLCPKCW
SWDVVPTEVS GEGSVFLCTL IHQERDPNAA LSEPVPAAAV ELVEQSGLRY LAPIVNCPLE
AIRLDMPVRL TWVDRDGLAW PAFEPAVPIE DRR
|
|---|
| |