Gene Franean1_4055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4055 
Symbol 
ID5672413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4835440 
End bp4835778 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content70% 
IMG OID641242931 
Producthypothetical protein 
Protein accessionYP_001508348 
Protein GI158315840 
COG category[S] Function unknown 
COG ID[COG5470] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.150808 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGCG ACCGCACAGG AGAGCACATG CCCAAGGGAT ACGTCATCCT GACCGAGGCC 
ATCAAGGATC CCGAAGGTAT GGCGGCCTAC AGCCGCCTGT CAGGTCCTTC GGTCGCCGCG
GCGGGTGCCA AGGTCCTCGC CGTGGACGAG GACGTCCAGC TGCTCGAGGG GGAGTGGCAC
GGGAACCGCA CGGTCGTCCT CGAGTTCCCG TCGGCGGACG CGGCCCGTGC CTGGTACGAG
TCCGACGACT ACCAGCGCGC GAAGCCCGTG CGGCAGGCCG CGGCGGACTG CAACGCGGTG
CTCCTCTCCG GGTTCGAGAT GCCGGCCCGC CGAGCCTGA
 
Protein sequence
MHRDRTGEHM PKGYVILTEA IKDPEGMAAY SRLSGPSVAA AGAKVLAVDE DVQLLEGEWH 
GNRTVVLEFP SADAARAWYE SDDYQRAKPV RQAAADCNAV LLSGFEMPAR RA