| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3877 |
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| Symbol | |
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| ID | 5672240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4606672 |
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| End bp | 4608693 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641242755 |
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| Product | ABC transporter related |
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| Protein accession | YP_001508175 |
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| Protein GI | 158315667 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0212257 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGGTGG ACCGAGATCC CGACGCCATC AGTCTCGTTC CGGCGCAGCG AGAGGCCCAA
TCCCGACCGC CCGAGGGGCC CGATCCGGGG ACCGGCGCAC CGGAGCAGGC CCGTGATCCG
GTACTGACCT ATGGAAGGGA GGACGACGAC ACCCCACGCC CATGGAGCCG GCACGACCGG
ACAATGGAAC GGACCGGCGT GCTCGCGATG ACCCGGCGGC TGCCAGGGCT GCTCCGGCTG
GCCTGGTCAC TGGCCTGGGA GGCCGACCGG ATCGGCCTGG TCACCATGGT CGGCCTGCGA
GTTCTGTCCG GGTTGGTCGA GGCCGCCGGC CTGCTCGCCG TCGCCGGCGC GCTGACGGCG
GTGCTCAGCG AGGGGCCGAC CCCGCAGCGG CTGCACGACG CGATTCCCGC GCTGGTCCTC
GTCGTCGGCG CCGGCGTTGT CCGGACGGCG ATCTCCCTGG TCACCAGCCT CCTGCAGAGC
CGCTTCGGGC CCAGGGTCGA CCGCGTCTCG ATCGTGCGGC TACTCGACCT GGCCACCCGG
ACGTCCGTGA TGTCCTTCGA CGACCCCCGG TTCGTCGACG ATCTTGATGC GGCCGAGCGG
GGTGCCGCCA GCGGGCGTCA GCTCGTCGAC AACGCGGTCA ACGTGTTCAC CTCGGGGGTG
CAGATGGTCG CCGCCGGCAG CGTCCTGGGT GTGTTGCACC CGCTCCTGCT GCCGCTGCTG
GTGCTCTCGA TTCTGCCGGA CGGCTGGGCG ACGGCGCGTT CGGCGCGGCT GGCGCACGCC
TCCTGGCTCG GGCGCATCCG CAAGATCCGG CGTCAGTTCA TGCTGCGCAA CCACATGACC
GACCGGGACT GCTCCGCGGA GATCCGCTCG TTCGGCCTGA ACCGCTTCCT GCTGGACGAG
TACATCGCGC TGGCCCGGGA GAACGAGGCC GAGCAGGTGC GCGTCGCCCG GGGCCAGGCG
CTGTACCGGC TGACCGGGGA GGTCGTGTCC GGACTCGCGC TGGGGGCCGT GTACGTGACG
CTGGTCCTCC TGCTCAACGC CGAGATCATG CCGCTCGCCG CCGCGGGCAC GGCGGTCCTG
GCCATCCGGA ACGGGCGAGG CGCGCTGTCC TCGGCGCTCG ACAGCCTGAA CAGCGCCTTC
GAGAACTTCC TGTACTTCGG GGAGTACCGG TCGTGGATCG CGGAGGCGGC CCGCCGGGTA
CCGGCGCCAC GCGGCGACAT GGCGCCGGCC GAACCGGCAG TCGTCCGGGT CGACGCCGCC
ACCTACACCT ACCCGCACAC CGACACCCCG GCGCTGCGCG GGGTCACCGT CGAGCTGCGG
CGCGGCCAGG TCGTCGCGTT CGTCGGCGCC AACGGCAGCG GCAAGTCCAC CCTCGCGAAG
ATCCTCGCGG GCCTGTACGA ACCGGACGAG GGGACGGTCA GCTGGGACGG GGTCGACCTG
GGCCAGGTCG ACCCGGACAG CGTCCGGGCA CGGGTCGGTC TGATCCCGCA GCAGTACACA
CAGTGGCCGA TGTCGGCCCG GCTCAACATC GCCGTCGGGA ACATCGACCG GCTCGCCGCG
GACGGCCCGG ACAGCGTGAT CCCGGCCGCG ACGGCCACCG GCGCGGCCGA GGTGATCGAG
AAGCTGCCGT ACGGCTACGA CACCTCGCTG GCCCGGCAGT ACAACTCGGG GCACGACCTC
TCCGGCGGGC AGTGGCAGCG GATCGCCTGT GCGCGGGCGG TCTACCGGGA CGCCCCGTTC
CTCATCGCGG ACGAGCCGTC CGCGGCCCTC GACGCCCGCG CCGAGCAGGC GCTCTTCGAC
CTGATCCGCG AGCAGGGGCG GGACAGGGTG GTCCTGCTGA TCACCCACCG GCTGGCCAGC
GTGCGCACCG CCGACCGCAT CTACGTCCTC GACGAGGGCC TGGTCGTCGA CAACGGCACG
CACGCCGAGC TGATGACGCG GCCCGGCATC TACCAGGAGC TGTTCAACCT GCAGGCACGA
CAGTTCGTCG ACCTGCCGGA TCCGGCGGCG CCAATGCCCT GA
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| Protein sequence | MPVDRDPDAI SLVPAQREAQ SRPPEGPDPG TGAPEQARDP VLTYGREDDD TPRPWSRHDR
TMERTGVLAM TRRLPGLLRL AWSLAWEADR IGLVTMVGLR VLSGLVEAAG LLAVAGALTA
VLSEGPTPQR LHDAIPALVL VVGAGVVRTA ISLVTSLLQS RFGPRVDRVS IVRLLDLATR
TSVMSFDDPR FVDDLDAAER GAASGRQLVD NAVNVFTSGV QMVAAGSVLG VLHPLLLPLL
VLSILPDGWA TARSARLAHA SWLGRIRKIR RQFMLRNHMT DRDCSAEIRS FGLNRFLLDE
YIALARENEA EQVRVARGQA LYRLTGEVVS GLALGAVYVT LVLLLNAEIM PLAAAGTAVL
AIRNGRGALS SALDSLNSAF ENFLYFGEYR SWIAEAARRV PAPRGDMAPA EPAVVRVDAA
TYTYPHTDTP ALRGVTVELR RGQVVAFVGA NGSGKSTLAK ILAGLYEPDE GTVSWDGVDL
GQVDPDSVRA RVGLIPQQYT QWPMSARLNI AVGNIDRLAA DGPDSVIPAA TATGAAEVIE
KLPYGYDTSL ARQYNSGHDL SGGQWQRIAC ARAVYRDAPF LIADEPSAAL DARAEQALFD
LIREQGRDRV VLLITHRLAS VRTADRIYVL DEGLVVDNGT HAELMTRPGI YQELFNLQAR
QFVDLPDPAA PMP
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