Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3760 |
Symbol | |
ID | 5672125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4455460 |
End bp | 4456233 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641242641 |
Product | protein tyrosine/serine phosphatase |
Protein accession | YP_001508061 |
Protein GI | 158315553 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2365] Protein tyrosine/serine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.068638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGCCT CGCAGGAAGT GCCTCAGTGG ATAGAGCTCA CCGGCGCGCA CAACGTCCGG GATCTCGGAG GGTTACCCGC GGCCGGGGGC ACCGTCCGCC CCGGTGTGCT GCTCCGAGGT GACAACCTCG ACAGTCTGAC CATCGAAGAC ATCGCGCTGC TGCGGGACAG GGTGGGCCTG CGCGGCGTCG TGGACCTGCG CGCCCCGTTC GAGAACCCGC GGGCCGCCGA GTGGTTCCCG CAGCTGGGCA TCACCTGGAT GCACGAGCCG CTGATGGACT TCACCGGGCT CAGCGACCCG AAGGCGCTGC GGGACCGGAT CGGCGGCGAC TACGCCCGGT TTTACGCGAT CATGCTCGAG AACGCCGGCC CGGGGCTGGT CCGCATCCTG GACTTCCTCG TCTCCGGTGA CCGCACCCCG GCGCTGGTGC ACTGCGCCGC GGGCAAGGAC CGCACCGGCA TCACGACGGC CGTCCTGCTC GCCGCCGCCG GTGTCGAGCG CGACGCGATC GTCGCGGACT ACCTTGCCAC CGAACAGCGG ATCGAGCGGG TTCGGGAGGC ACTGAGCCGG CGGCCGGAGT ACAGCCACCT GAGCGCGGGC CGATCGGCGC CGCGCGGCAT CGGGACCGCG GTTCTCGTCG ACCCGAAGGC CATCGCCAGC GTGCTCGACA CGATCGACGC CGCCCCCGGC GGCCCGGCCG GGTACCTCGC CGCCAACGGT GCGACCGCCG AGCAGATCAG CCGCTGGCAG GAAATGATCA TCGAGTCGCG CTGA
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Protein sequence | MTASQEVPQW IELTGAHNVR DLGGLPAAGG TVRPGVLLRG DNLDSLTIED IALLRDRVGL RGVVDLRAPF ENPRAAEWFP QLGITWMHEP LMDFTGLSDP KALRDRIGGD YARFYAIMLE NAGPGLVRIL DFLVSGDRTP ALVHCAAGKD RTGITTAVLL AAAGVERDAI VADYLATEQR IERVREALSR RPEYSHLSAG RSAPRGIGTA VLVDPKAIAS VLDTIDAAPG GPAGYLAANG ATAEQISRWQ EMIIESR
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