Gene Franean1_2590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2590 
Symbol 
ID5670984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3069353 
End bp3070135 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content66% 
IMG OID641241506 
Productmethyltransferase type 11 
Protein accessionYP_001506926 
Protein GI158314418 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.205764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCG ACCTGTTCAC CGGAACCGCC GTGCACTACG CACGCCACCG ACCCGGCTAC 
CCGACGGCAT TCCTGACCGA GGTCGCGCGG AGGTTCTCTC TCCCAGGGGG CCGGCTTCTC
GACCTCGGCT GCGGACCCGG AACCCTCACC ATCGCGCTGG CTGGCCGGGT ACGCGAAGCC
GTCGGTGTCG ACCCCGAACC TGACATGCTC GCGGAGGCGA CACAGCAGGC GAGCCTGGCG
GGCATCCGCA ACATCAGGTG GGTAGAGGCA CGCGCGGAGA ACCTCCCCCC AGACCTCGGC
CGATTCCAGC TTGTGACCAT GGGCCGCTCG TTCCACTGGA TGGACCGAAA CCAGGTGCTG
ACAATGCTTG CCGAGATGGT CACCCCAACC GGCGGGCTTG TGATCGTCAA CGACAACTGC
CTCGTCCGGC CTGCCAGCGA CTGGCAGCGA ACGCTCGAAG AAATACAGGC GAAGTTCCTC
GGAACCGTCC GCCGTGCCGG CAGTGGCATC TTCGCGCCGC CCACGGAGCC CCATGAGACC
GTCCTGGCCC GATCTCCGTT CCGGCATGTC GAACGGGTCG TCTTCGAGTT CGAACGGCAG
TGGACGGTCG AACAGATCGT CGGCTACCTG TACTCGACGT CGTTCCCCAT CAGGCGGCTG
CTGGGAGACC GGCGAGTCTC CTTCGAGAAG GAGATCGTCG AAGCGCTGCG TGCCTACTCC
CCGGACGGCA GGTTCGTGGA ACCGGTGCAC CTCGAAGCGA TCTTCGCGTC GTCGAACACC
TGA
 
Protein sequence
MTGDLFTGTA VHYARHRPGY PTAFLTEVAR RFSLPGGRLL DLGCGPGTLT IALAGRVREA 
VGVDPEPDML AEATQQASLA GIRNIRWVEA RAENLPPDLG RFQLVTMGRS FHWMDRNQVL
TMLAEMVTPT GGLVIVNDNC LVRPASDWQR TLEEIQAKFL GTVRRAGSGI FAPPTEPHET
VLARSPFRHV ERVVFEFERQ WTVEQIVGYL YSTSFPIRRL LGDRRVSFEK EIVEALRAYS
PDGRFVEPVH LEAIFASSNT