| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2183 |
|---|
| Symbol | |
|---|
| ID | 5670583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 2617237 |
|---|
| End bp | 2618157 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641241104 |
|---|
| Product | hemerythrin HHE cation binding domain-containing protein |
|---|
| Protein accession | YP_001506525 |
|---|
| Protein GI | 158314017 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00026] deazaflavin-dependent nitroreductase family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.576413 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.216575 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGACG AGAATCAGTT CGAGGAATTT CTGAAGTTCC AGCAGGGGAT CATCGACGAA
TTCCGTGTCA ACGCAGGGAA AGTTGGCGGG ATGTTCGAGG GTTCCACCCT GTGTCTTCTC
ACCACGACGG GGGCGCGCAC CGGCCGGCCC CGCACCCAGC CGCTCGGCCT GATGCAGATC
GACGGGCAGG ACCTGGTCGT CGCCTCGGCG GCCGGCGCAC CGACCCATCC GGCTTGGTAC
CACAACATCC GCAAGAACGC GATCGTGACG GTCGAGGCAG GCGATCGCAC GTACCGGGCG
ATCGCCTCGA TCCCCCCGCG CGAGGAGCGC GACCGGCTCT TCTCGGAAAT CGCCGCGCAG
CAGCCGGGGT ACGGCGAATA CCAGACGAAG ACCGATCGGG TCATTCCGGT CGTCGCACTC
CATCCGATCG ACCTCGATCC CGACCGGGTC AAGCACCTCG GTGACGAACT GGTCGAACTG
CACGACTGGC TGCGCGGCGA ACTGGCGGAC CTGCGCAGGC GGATCGACGA CGTGGTCGAG
GGCAGGGCGA ACGATGTCAC GCCGCAGGCC GAGGGCGGCC ACCTGCTCGC CGAACTGCGG
TCGCACTGCC TGGACTTCTG CCACGCGCTG AACGTCCACC ACACCGGCGA GGACGTCGGC
GCCTTCCCAG TGCTCCGCGA GCGGTTCCCG GCGTTGGAAC CGGTGCTGGA GAAGTTCGCC
GAGGAGCACA AGGTCGTGGC CGAACTGCAG AACCGGATCA AGGAAGTGGT CGAGGACTTC
ACTCCCGACC GGGACGATCC GGTGCGGCTG CGAGCGGAGG TGGCGGACCT TGCGGACCGG
CTCGAAGCCC ACTTCGACGA GGAGGAACGC CAACTCGTCA CCGCGCTGAA CGCGATGGGT
CCCGCGCCGG TGCGCGGCTG A
|
|---|
| Protein sequence | MSDENQFEEF LKFQQGIIDE FRVNAGKVGG MFEGSTLCLL TTTGARTGRP RTQPLGLMQI
DGQDLVVASA AGAPTHPAWY HNIRKNAIVT VEAGDRTYRA IASIPPREER DRLFSEIAAQ
QPGYGEYQTK TDRVIPVVAL HPIDLDPDRV KHLGDELVEL HDWLRGELAD LRRRIDDVVE
GRANDVTPQA EGGHLLAELR SHCLDFCHAL NVHHTGEDVG AFPVLRERFP ALEPVLEKFA
EEHKVVAELQ NRIKEVVEDF TPDRDDPVRL RAEVADLADR LEAHFDEEER QLVTALNAMG
PAPVRG
|
|---|
| |