Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2180 |
Symbol | |
ID | 5670580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 2614479 |
End bp | 2615162 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641241101 |
Product | response regulator receiver protein |
Protein accession | YP_001506522 |
Protein GI | 158314014 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.532549 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGACG CAGTGCAACT CCTCAAGGCA ATCTCAGACC TACTAGGCGT CGTCGTCTGG CCAGCCCTCT TTTTCTTTGT CGTAATAAGA TTCAGGTCGA GTTTTGCTGA ACTATTCAGT AATCTCGCAG AGTTCACTGT CAAGGCGCCT GGGATCGAAG CATCGGCCAG TCGTCAGCAG ATAGAGGCGG CGGCATCTCT CGGTGCCGCC GCCGCCGAGC AGCGCGTCGC CGGTGAGTCG GGCAGTGGAA GCGAAATCGA CGCACGTGCC ATCGCGGATG CGCTGCCCGA TGCGCGAATA CAGCGGAGGT TGATCGGATC ACTCGTGCTC TGGGTCGACG ATAGGCCTAG TAATAACCTT TACGAAAGGC ACGCCCTCGA ATCGCTGGGT GTGCGATTTG TGCTGGCGAC TTCGACGGAT GAAGCATTGA GTCTACTTAA GCATCAATCG TTCGATATGA TCATCTCGGA TATGGGTCAC CCGGATGATC CAAGGGCTGG TTACACTCTT CTCGACAGGC TTCGCGTTCA GGGTGACCGG ACTCCGTTTT TTATCTATGC GGCCTCCCGC GCTCCAGAGC ACGTTAGGGA ATCGCGGGAG CATGGCGCGA TCGGATGCAC TAACCTTGTG AATGAATTGA CGGAAGTCGT CACATCGACC CTGGCCTCAC AACGCAGTTT CTGA
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Protein sequence | MGDAVQLLKA ISDLLGVVVW PALFFFVVIR FRSSFAELFS NLAEFTVKAP GIEASASRQQ IEAAASLGAA AAEQRVAGES GSGSEIDARA IADALPDARI QRRLIGSLVL WVDDRPSNNL YERHALESLG VRFVLATSTD EALSLLKHQS FDMIISDMGH PDDPRAGYTL LDRLRVQGDR TPFFIYAASR APEHVRESRE HGAIGCTNLV NELTEVVTST LASQRSF
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