Gene Franean1_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0009 
Symbol 
ID5675643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp15245 
End bp15862 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content71% 
IMG OID641238938 
Producthypothetical protein 
Protein accessionYP_001504384 
Protein GI158311876 
COG category[R] General function prediction only 
COG ID[COG4122] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.198242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGTGG CGTTGCGGCA GGCGGCCGAG GCCGCCAAGG GCTTCATGCC ACCCGAGGAA 
GGACTGGCGC TGCACGCGGC CGCGGCCGAA CTGCCTGGTG GCGGACTGAT CTGCGAGATC
GGCACCTACT GCGGGAAATC CACTCTCTAC CTTGCCGCCG CCGCCCGGCT CGTCGGCGCC
GCGGTTGTCA CGGTCGATCA TCATCGGGGA TCGGAGGAGA ACCAGTCAGG CTGGGAGTAC
CACGACACCA CGCTCGTCGA CCCCCGCACC GGCCGGCTGG ACACGCTGCC CACGCTGCGC
ACGACCCTGG AGGCCGCCGG GGTCGAGGAC GTCGTCACCG CGGTGGTAGG GCGGTCCGAG
ATCGTCGGGC GGTGGTGGTC CACCCCCATC GACCTGCTGT TCCTCGATGG TGGGCACACC
GAGAAGCAGG CGCAGGCCGA CTACGAGGCC TGGGCCCGCC ACGTGCGTCC CGGCGGCCGG
CTGGTGATCC ATGACGTGTT CCCCGACCCC GCTGACGGCG GTCAGGCGCC GTACCACGTC
CTGCTTCGCG CCGTTCGGGA CGGCTTCAGC GAGATGTCAC GCACGGGATC GCTGCGGGTC
CTCCGCCGGC TCTTCTGA
 
Protein sequence
MDVALRQAAE AAKGFMPPEE GLALHAAAAE LPGGGLICEI GTYCGKSTLY LAAAARLVGA 
AVVTVDHHRG SEENQSGWEY HDTTLVDPRT GRLDTLPTLR TTLEAAGVED VVTAVVGRSE
IVGRWWSTPI DLLFLDGGHT EKQAQADYEA WARHVRPGGR LVIHDVFPDP ADGGQAPYHV
LLRAVRDGFS EMSRTGSLRV LRRLF