Gene Spea_3935 details

Gene Information

• Locus tag: Spea_3935
• ID: 5664319
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: -
• Start bp: 4783462
• End bp: 4784109
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 641238599
• Product: regulatory protein TetR
• Protein accession: YP_001503780
• Protein GI: 157963746

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0867734
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAATT GGCAGCAGCG AGAGAGCTAC TTAACCGATA TCGCCGAGCG TTGCTTGCGA 
GGCCATAAGA GCTTCGATCT GCGCCGCTCC CACCTAGTTG AGGCGAGCCA GATCTCTAAG 
GGCACCATCT ATAATCACTT TCCTACTGAG GCGGATCTGG TGGTGGCGGT TGCGACGGCT 
CATTACAGAA AACGTCTAGA GAGAGCGGCC ATCGATGACG CGCTGTACGC TGATTACTTG 
ACTCGATTTC TGATGCATCA TTGCTGGGGC CTGCGAGACG ATCTGCTATA TGATCGCTTT 
ATCATCTCCC GTGTGATGCC CAATTCTGAG CTGCTACAGC AGGTGACCGA TGAAAATCGA 
GCCGCATTTG AACAGATCTA TGGCGAGTAT ATTCGCTGGA ACAGGGAGCT GATAAAGGCC 
GTCGGTGTGG TCGAAGGCTT TAATCGTGCC GAGCTAGTGG GTAATTACCT ACGCGGCGCA 
CTGATTAATT GTGATGATGC GGGTAAGCAG TATGACGACG CCAGCCTGTA CTACCAATTT 
AGTTATGCGC TAACCCAGTT GATGGGGCAC TCAGATAAGC GCATTCCAAA GCTGGCGGAC 
TATGCCAGCT GGCTTGCCCG GCTTGAGCCT GCGGCAAACG CAGCTTAG 

 

Protein sequence

MSNWQQRESY LTDIAERCLR GHKSFDLRRS HLVEASQISK GTIYNHFPTE ADLVVAVATA 
HYRKRLERAA IDDALYADYL TRFLMHHCWG LRDDLLYDRF IISRVMPNSE LLQQVTDENR 
AAFEQIYGEY IRWNRELIKA VGVVEGFNRA ELVGNYLRGA LINCDDAGKQ YDDASLYYQF 
SYALTQLMGH SDKRIPKLAD YASWLARLEP AANAA