Gene Spea_3671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3671 
Symbol 
ID5664056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp4467837 
End bp4468493 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content43% 
IMG OID641238331 
Productpentapeptide repeat-containing protein 
Protein accessionYP_001503517 
Protein GI157963483 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGAA TAGATGAGCA ATTTGAAGGG AATGATTTTA GTCATCAAGA CTTGAGTGAT 
TCACATTTTG AACGATGTAA GTTTTATAAC TGTAATTTTA ATCATACCGA TCTCAGAGAC 
AGCCGTTTTG TCGACTGCTC ATTTATCGAG TCCGGTTCAC TAAGCGGTTG CAACTTTGAG 
TATGCGAACT TGCAAGATTC GAGCTTCAAA GGTTGTCAGT TATCTATGGT GAGCTTTACT 
GGGGCTAATT GCTTCGGCGT GGAGTTTAGA AACTGCGACT TAAAGGGGGC TAACTTTCTT 
AAGGCGAGCT TTGCCAACCA GATCAGTCGA CAAGCCTATT TTTGTTCTGT GTATATCACT 
GGCTGTAACT TGTCTTACGC TAATTTTGAG CGTCAATGCA TAGAGAAGTG CGATCTATTT 
GAAAACAAAT GGACTGGAGC AAATTTATAT GGGGCATCGT TTAAGGGATC AGATTTGAGC 
CGGGGGGATT TTTCCAGTGA TGCCTGGGGG CAGTTTAATG TGCGAGGCTG CGATCTTTCT 
TATGCTGAGC TATCAGGGTT AGACCCAAGA AAGGTGGATC TCAGTAATGT CAAAATATGT 
ATGTGGCAGC AGGAGCAGCT ATTAGCGCCT CTTGGAGTCA TTGTTGGGGC TGACTAA
 
Protein sequence
MNRIDEQFEG NDFSHQDLSD SHFERCKFYN CNFNHTDLRD SRFVDCSFIE SGSLSGCNFE 
YANLQDSSFK GCQLSMVSFT GANCFGVEFR NCDLKGANFL KASFANQISR QAYFCSVYIT 
GCNLSYANFE RQCIEKCDLF ENKWTGANLY GASFKGSDLS RGDFSSDAWG QFNVRGCDLS 
YAELSGLDPR KVDLSNVKIC MWQQEQLLAP LGVIVGAD