Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2509 |
Symbol | |
ID | 5662902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3058044 |
End bp | 3058532 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641237135 |
Product | protein tyrosine phosphatase |
Protein accession | YP_001502364 |
Protein GI | 157962330 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAA TTTCCTCGGT TCTATTTGTA TGTATGGGCA ACATATGTCG CTCTCCCTCT GCAGAAGCCA TGTTCAGATC AAAATCTCTA GCAGCTAGTT TAGATATTAA AATCGATTCA GCGGGAACGA TTGCTTTTCA TCAAGGGAAT TCTCCGGATA AACGATCGAT TGCAGCAGGT ATTAAGCGAG GTTTAAATTT TGATGGCATG AGAGCTAGGC AGGTTGAGCA AACTGACTTT GCCGATTTTG ATTTGATTCT TGCTGCGGAT AAACAAAATC TTGAGGACTT GAAGCGAATA TGTCCCACAG AGTACCAAGC TAAATTGGCG TTAATTTTAG ATTTCTGTGA TTTTGACTAT CACCAGAAAG CCTATACTGA AGTACCTGAT CCATTCTATG GTGCAGGCGA CGGTTTTGAG TTAGTTCTGG ATTTACTTGA AAACAGCTGT GATCAGCTTG TAAGACGCAT CCAAAGAGGC CGTTTGTAA
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Protein sequence | MKQISSVLFV CMGNICRSPS AEAMFRSKSL AASLDIKIDS AGTIAFHQGN SPDKRSIAAG IKRGLNFDGM RARQVEQTDF ADFDLILAAD KQNLEDLKRI CPTEYQAKLA LILDFCDFDY HQKAYTEVPD PFYGAGDGFE LVLDLLENSC DQLVRRIQRG RL
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