| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2092 |
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| Symbol | |
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| ID | 5662485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2532902 |
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| End bp | 2533942 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641236687 |
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| Product | porin |
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| Protein accession | YP_001501947 |
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| Protein GI | 157961913 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.078027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAA CAATTAAATT AACATTGCTT GCCGCTGCAG TATTAGCTTC ACCAAGTGTT
ATGGCAGATG CCTATAAGTT CTATGGTCGT ATCGATTACT CGGTGACTCA CTCAGACAGT
GGTAGTGCGA CTCATAGTGG CAAAAGTGGC ACTATTTTAG AGAACAACTG GAGCCGTTTA
GGTGTTAAAG GTGATGCGGC GCTGAATGAA GAGTTTACCG TGTTTTACCA AATTGAAGTT
GGTGTAAACG GTGCTAGTGA GGGCAAAAGC AATAACCCAT TTTCAGCGCG TCCTACTTTC
CTTGGTATTA AACACTCTAC AGCAGGTCAG CTAGCAGCCG GCCGTATTGA TCCTGTATTT
AAGATGGCGA AAGGCACGGC CGATGCAATG GACATGTATT CGCTAAAGCA TGACCGTTTA
TTTGCAGGTG ATAAACGTTG GGGAGATTCT CTTGAGTATA AAACCGTTAA ATGGAACAAG
CTTCAATTTG GCGCAAGCTA CATTCTAGAA GATAATTACT ATGACGAAGA TGATGTACGC
CGTGACAATG GTAACTACCA AGTTGCATTA ACCTATGGTG ATAAGCTTTT CAAAACTGGC
GATTTATATC TTGCAGCCGC ATATACCGAT GGCGTTGAAG ACATCAAAGG TTTCCGCGCT
GTTGCTCAGT ACAAAATTGA CAAGCTAATG TTAGGTACTA TTTACCAAAG CTCTGAAATC
GTTAATCCAA ACTTAGATAA CTGGCAGCAG CGTGATGGTG ATGGTTTTAT TGTTAGCGCT
AAATATCAGA TTGATAAGTT AACACTTAAG GCTCAATACG GTCAGGACGA CTCTGGAACG
GGTAAAATTG CAGGCCGAGT TTATAGTCAA TTAGGCGCAG CAGCGACTGA AGTGCCTGAG
GTCTCTCAAT GGGCTATTGG TGCTGAATAC CGTCTTTCTA AATCAACTCG TGTTCATACT
GAAATCGGTC AATTTGATGT GAAACAATAT TCAGATTTTG ATGACACGAT TGCTAGTGTT
GGCTTTAGAA TCGATTTCTA A
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| Protein sequence | MMKTIKLTLL AAAVLASPSV MADAYKFYGR IDYSVTHSDS GSATHSGKSG TILENNWSRL
GVKGDAALNE EFTVFYQIEV GVNGASEGKS NNPFSARPTF LGIKHSTAGQ LAAGRIDPVF
KMAKGTADAM DMYSLKHDRL FAGDKRWGDS LEYKTVKWNK LQFGASYILE DNYYDEDDVR
RDNGNYQVAL TYGDKLFKTG DLYLAAAYTD GVEDIKGFRA VAQYKIDKLM LGTIYQSSEI
VNPNLDNWQQ RDGDGFIVSA KYQIDKLTLK AQYGQDDSGT GKIAGRVYSQ LGAAATEVPE
VSQWAIGAEY RLSKSTRVHT EIGQFDVKQY SDFDDTIASV GFRIDF
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