| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1233 |
|---|
| Symbol | |
|---|
| ID | 5661632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 1500535 |
|---|
| End bp | 1501386 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641235795 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001501095 |
|---|
| Protein GI | 157961061 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCATACA CAATCGCTGT TTCATTCGAT AAATTCATCG AAAGGATATC AATTACAGGC
AATCAGGCAG ATATTGCAGA GTCTCGATGT AAATCTATAG TCAACCTGTT GGGTAAAGAG
TTTAATATAT TAGAAGCTTT TCCCTTAGGT TCTTTGGTTA GTGGGACATC TTTGAGCGGA
TTTGCAGATG CGGATGTAAT GTTAGTCCTT CATTATGGAG CGCATGCTGA AAATAAGTCA
CCAACGGAAT TCTTACAATC AGTACGTGAT AAATTAAGCG AATATAACAC TCGTATGGCT
AAAAAAAATG GCCAAGCAGT GACGTTGTAT TTTAAAACCT GGCCTAATGT AGATATCGTT
CCTGCATACA GAGTTTCCGA TGACGGAAGC TTCTATTGCT ACAAAATACC AAATGCGAAT
AACAACTCAT GGATTGAAAC AAGACCAAAA ATTCATATCA ACAACATGAA GAAAGCGTCT
GCACAAAAAA TTCATCTGAT TAAAATGATC AAAGAATGGA ACAGAAAACA TTCTTCATAT
TTATCATCCT TTCATATCGA AGTTATGGCA TTAAGCTATG AGAATTTTTA TAGCGATTAT
GCGTGGCATG TATTTAAGTT TTTTGAGCAC ATGCATACAA AAATACAAAG CTACATCCCA
TCACCATCTG GACTCGACGG TTATGTTGAT GATTATCTGA GTGATTCTGA TAGGCTAGAA
GCGAGCAATC GAATTGAAGC TGCATTGGGC AAAAGCCGTG ATGCTTGGTC TGCTCACTAC
AATAACAACG ACAAAGAGTC GATTGAGAAA TTCGGCAAAT TATTTGGAGA TAGGTTTCCA
TCTTATGGCT AG
|
|---|
| Protein sequence | MPYTIAVSFD KFIERISITG NQADIAESRC KSIVNLLGKE FNILEAFPLG SLVSGTSLSG
FADADVMLVL HYGAHAENKS PTEFLQSVRD KLSEYNTRMA KKNGQAVTLY FKTWPNVDIV
PAYRVSDDGS FYCYKIPNAN NNSWIETRPK IHINNMKKAS AQKIHLIKMI KEWNRKHSSY
LSSFHIEVMA LSYENFYSDY AWHVFKFFEH MHTKIQSYIP SPSGLDGYVD DYLSDSDRLE
ASNRIEAALG KSRDAWSAHY NNNDKESIEK FGKLFGDRFP SYG
|
|---|
| |