| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1104 |
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| Symbol | |
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| ID | 5661503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1337892 |
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| End bp | 1339205 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641235650 |
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| Product | glucose/galactose transporter |
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| Protein accession | YP_001500966 |
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| Protein GI | 157960932 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0045785 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCAA CGACTCAGGC TCAAGCTAGC CCCAAGAGCA GTTTACTGCC TATGACCATA
ATTGGTGTGT TATTTTTCAT CTTCGGATTT GTGACTTGGC TTAACGGCTC GCTGATCCCT
TTCCTTAAAA TTATTTGTGA GCTAAACGAA TTCCAAGCCT TATTTGTGAC GTTTGCTTTC
TATATTGCCT ATACGGTGAT GGCGCTGCCG ATGTCATCGA TATTAAAGAA AACCGGCTAT
AAGAATGGCA TGGCAATTGG CCTAGCTATT ATGGTGGTTG GTTCTTTGCT ATTTATTCCT
GCGGCACAAA GCGCAAATTA TACTCTGTTC TTAGGAGCCT TGTTTGTTCT CGGTACCGGT
CTAACCATTC TACAAACCGC ATCTAATCCT TATGTTGTGC ATATTGGCCC TAAAGAAAGC
GCCGCGATGC GCATTAGTAT CATGGGGCTT ATTAATAAAG GTGCAGGCGT CATCGTACCT
ATCTTATTTA CTGCATTGGT ACTTTCAGGT TTTGAAAACT TTACAGCAGA TCATCTAGCT
GCATTAAGTG AAGCTGAGCG ATTAGCACAA ATTAGTGAAT TGTCTTCAAG ACTGGTTATG
CCATATATCT ATATGGCTGT CGCGCTGACT TTCCTCATTG GTTTAGTTAA GTTTTCATCG
CTTCCAGAAT TAGAGTTTGA AGCAGCTGAA GATCATCAGG AAAAGGGCAG CATTACCCAT
TTCCCGCAGG TAGTTCTTGG CGCCGTAGCC CTGTTTGCCT ATGTTGGCGT CGAGGTTATT
GCTGGCGACA CTATTGGTTT GTATGGCGAA AGCTTAGGTG TTCATAACTT TGCGTCGCTG
ACCTCTTATA CCATGGTGTT TATGGTATTT GGCTACATTA TCGGCGTGAC CTGTATTCCT
AAGTTTATCA GCCAAGAGAA GGCGCTACTT GGCTCGGCGA TAGCAGGTAT TGCATGTATC
ATTGGCGCAG CCTTAGGTTC GCGTGAAAGC ACTATGATTG CCGATGTGCT TTGGGGTTGG
AGTGGTATTC CTGTGATCCC AGACACAGTG ACTTTTGTGG CTATGATGGG CCTCGCTCAT
GCACTTGTAT GGCCATCAAT CTGGCCATTA GCATTAGAAG GGTTAGGTAA GTATACGGCT
CAAGGTTCTG CATTGCTTAT TATGGGGATC TCGGGGGGCG CAATCTTACC TCTGGTATTT
GGTAAGGTGG CATACTTTGC AGACAATACT CAGGTAGCTT ATTGGGTTGG CCTACCTTGT
TATCTATTCA TCTTATTCTA CGCCCTAAAA GGCCATAAGA TGCGTAGCTG GTAA
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| Protein sequence | MTATTQAQAS PKSSLLPMTI IGVLFFIFGF VTWLNGSLIP FLKIICELNE FQALFVTFAF
YIAYTVMALP MSSILKKTGY KNGMAIGLAI MVVGSLLFIP AAQSANYTLF LGALFVLGTG
LTILQTASNP YVVHIGPKES AAMRISIMGL INKGAGVIVP ILFTALVLSG FENFTADHLA
ALSEAERLAQ ISELSSRLVM PYIYMAVALT FLIGLVKFSS LPELEFEAAE DHQEKGSITH
FPQVVLGAVA LFAYVGVEVI AGDTIGLYGE SLGVHNFASL TSYTMVFMVF GYIIGVTCIP
KFISQEKALL GSAIAGIACI IGAALGSRES TMIADVLWGW SGIPVIPDTV TFVAMMGLAH
ALVWPSIWPL ALEGLGKYTA QGSALLIMGI SGGAILPLVF GKVAYFADNT QVAYWVGLPC
YLFILFYALK GHKMRSW
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