| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0991 |
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| Symbol | |
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| ID | 5661390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1205124 |
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| End bp | 1207901 |
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| Gene Length | 2778 bp |
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| Protein Length | 925 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641235537 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001500853 |
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| Protein GI | 157960819 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0120803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCTA AGATGAAACC TAAGATGAAA ATTTCAGCAT TGAGCCTAGC CATAGCTATG
GCAACGCTCA CCCCCTCAAC CTCGTTTGCA GCCGAAGCTG CTGACAAACC TGAAGCCAAA
AAAGAAATGG AAAAAATGGA AGTCACAGGT TCACGTATCA AACGTGCCGA CTTCGAAGGT
GTTGCCCCAG TAACCGTGAT CACCGCCGAT GATATTGCCA ATAGCGGCCT TAACTCTATT
GCAGAAGTAC TGCAATCCTC TGTTGCCAAT ACTGGTGGCT CGCTAAACGG TGAAAGCGAT
GGCTATACTG ATAGCGCAAG CTCGGTTAAC TTACGTGGTA TGGGCGCAAA CCGTACCTTG
GTACTGATCA ACAGTCGTCG CCAGGCCTCT TTCCCCAGCG CTGCAGGCGG CACCTCAAAC
TTTGTCGACG TCTCAGATAT TCCCTCTGCG GCGGTTGAGC GTATCGAAAT CCTAACCGGT
GGCGCTTCGG CAATCTACGG CTCCGATGCG GTAGGTGGTG TGGTGAACAT CATCTTAAAG
CAGCAATACG ATGGCGCTAA AGTCGCCGCT AAATATACCG AGCCAACTCA AGGTGGTGGT
GAGCAGTTAG ATCTATCTTA CCTACAAGGT TTTAATACTG AAAAGAGCCA AACCCTGTTA
ATGCTCGAAT ATAAGAAAGT CGAATCGATT CAAACATATC AGCGTGACGA CCTTTATAGC
CCGGCATATT ATGAAGATGA AGACGGTGAT CTTCGTTGGG GTGCAGGTCC TTATGGCGAC
GCAGCAGCTT CAAGCTGGTC ATCTCGAATT ACCGATTACA GTAAAGTTTA TCACGAAGAT
AAATACGTCA ACCTCGACGA GCAGCAATGT AACGAATTAT TTGGTGACAA AGGCATTTAC
ACCCCAGTAG GCAAGTATGA TTGCTACTAC GACAAGTACG CCGACCGAGG CCTACAATCG
GCTTATGACC GCGTTAACTT AGTGCTTAAC ACAAATTATG ACTTAAACGA TGATTGGCAA
ATTTACGGCA TGATCAACGC TTCTTATAAA GAAGCCACTA AGTACAAAGA TGAGAAAGGT
TTCGGCACCA ACATCTATCA AGATGAAGCG ACGGGTGCAC TGAGTTATGA CAAATATGAG
TTCGAAGATG ACAACCGCTT CTACCTAGCT CGCAGAATGG AAGAGTATCC TGGACCACGT
ACCTATGACA CGCAAAACAC TAAGGCAGCG ATCTCGTTTG GCGCCGACGG TACTATTGGT
GAGTACGAGC TAGATCTGTC ATGGTCAAGC AGCTATAACA AATACGAAAA GCAAAACCAT
CACATGGTGA GCGCCGATGC GCTGCTCGAT ATCGTCACTT TCGATCCTAA TGATACAGAT
CCATCAAAGT GGTATCCGCA TAACGAACTA ACGACCGAAC AAGCAAACCT ACTAATTGCT
GATTCAACCA AGAACTCAGA TTCAAGCATG CACCAGTTCC AAGCAGTATT TACTGGCGAT
TTAATGGAGT TACCCGCAGG CACCGCTGGC TTTGCAACGA CTGCTGAATG GGCACGTGAA
AGTTATGAAG ATACCCTAGA TGATGTCACA TCAAATGGTG GCTTAATTGG CATGGGTGGT
ACTGGTGGTA AAGGCGATCG TGACCGCGTC GCCGTTGCTG GTGAATTACA AATACCGCTA
CTTGCCGATA TCACAGGGGT TAAGTCATTA GACCTTTCTG CCGCACTGCG TTACGACCAA
TACTTAGATG ATTCCGATGT AGGCGGCGCA ACCACACCAC AGGTTGGCCT ATCTTATCGC
CCAATTAATG AAATCATGGT TCGTGCTAAC TGGGGTAAAA GCTTTAGAGC GCCAGATATG
CACCGTCTAT ATGCAGGCCG TACTATCGGC TTCGGTGGCA CCGATTATCC GCACCCTACT
ATTCCAGATG AGATCTATGA AGATGATTAT CGCTCAATTA CTCAAGGTAA CTTAAACCTC
GAAGAGGAAA AGGGTGAATT CTGGAACGTC GGCTTTGTGG CTAACATTAC TGATAATGCC
GATATCACGG TTGACTGGTG GAACATTGAG CTTGAAGGTG CCGTAAAAAC TATCTCTACC
GATGAAATGC TAGATGATAA GTCTTATTAC CAAACAGGAA ACTATAACAG CTGTGAAGAA
ATGGACGTTG TCGGTTACCT GACTGAATTT GATGACGATG GCATCGAAAA CATCGCCTGT
ATGCGTAAAG GCCCTATCAA CAGCGCCTAT GAAGCATCTG AAGGTATTGA TACCAGCTTT
AACTATCAAT TCCCAGAAAC AGCTATTGGT GAGTTCAAGT TTAAAGTCGC CGCCTCTTAC
TTAATTAAGA AAGAGTACCA AGAGCGTGTC GATAGCGAAA TTGAAGAGCA AACTGAAACC
GATTATTTCC CTAAGTGGAA AGGTAACGCA AGTCTGAGCT GGAACTATGA AGACTTCAGT
GCAACCGTTT ATTACTACTA CACAGGTGAA GCAAAAGGTG TGGATCTGTT CGAGTACTTA
GATGAGAACG GTGATGATGT CGAGTCTATG GAGACAGATA CCTTAGATGC TTATCAAACA
GTCAACATTA CCTTGAACTA CTACGCACCT TGGAAAGGTA AGTTCACTGC GGGTGTTAAA
AACCTAACCG ATGAGATGCC ACCTTTGTAC GATGTGCGTA ACGACAAGCA CAATGACTGG
CCTTTCTATG AAGATGACAA CAGTAGCTAT TCAAATACTG GACGTAGTTT CTTCCTTGGT
TATTCACAGA AGTTTTAA
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| Protein sequence | MKSKMKPKMK ISALSLAIAM ATLTPSTSFA AEAADKPEAK KEMEKMEVTG SRIKRADFEG
VAPVTVITAD DIANSGLNSI AEVLQSSVAN TGGSLNGESD GYTDSASSVN LRGMGANRTL
VLINSRRQAS FPSAAGGTSN FVDVSDIPSA AVERIEILTG GASAIYGSDA VGGVVNIILK
QQYDGAKVAA KYTEPTQGGG EQLDLSYLQG FNTEKSQTLL MLEYKKVESI QTYQRDDLYS
PAYYEDEDGD LRWGAGPYGD AAASSWSSRI TDYSKVYHED KYVNLDEQQC NELFGDKGIY
TPVGKYDCYY DKYADRGLQS AYDRVNLVLN TNYDLNDDWQ IYGMINASYK EATKYKDEKG
FGTNIYQDEA TGALSYDKYE FEDDNRFYLA RRMEEYPGPR TYDTQNTKAA ISFGADGTIG
EYELDLSWSS SYNKYEKQNH HMVSADALLD IVTFDPNDTD PSKWYPHNEL TTEQANLLIA
DSTKNSDSSM HQFQAVFTGD LMELPAGTAG FATTAEWARE SYEDTLDDVT SNGGLIGMGG
TGGKGDRDRV AVAGELQIPL LADITGVKSL DLSAALRYDQ YLDDSDVGGA TTPQVGLSYR
PINEIMVRAN WGKSFRAPDM HRLYAGRTIG FGGTDYPHPT IPDEIYEDDY RSITQGNLNL
EEEKGEFWNV GFVANITDNA DITVDWWNIE LEGAVKTIST DEMLDDKSYY QTGNYNSCEE
MDVVGYLTEF DDDGIENIAC MRKGPINSAY EASEGIDTSF NYQFPETAIG EFKFKVAASY
LIKKEYQERV DSEIEEQTET DYFPKWKGNA SLSWNYEDFS ATVYYYYTGE AKGVDLFEYL
DENGDDVESM ETDTLDAYQT VNITLNYYAP WKGKFTAGVK NLTDEMPPLY DVRNDKHNDW
PFYEDDNSSY SNTGRSFFLG YSQKF
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