Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0534 |
Symbol | |
ID | 5660934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 657864 |
End bp | 658310 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641235079 |
Product | 3-dehydroquinate dehydratase |
Protein accession | YP_001500397 |
Protein GI | 157960363 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0757] 3-dehydroquinate dehydratase II |
TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000293709 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAAC CCAAGATCTT ATTAGTAAAT GGTCCTAACT TAAACCTACT CGGACGCCGT GAACCGGGCC ACTATGGTCA CCATACCCTA GAGCAGATCG TCGATGAGCT TAAGCAAAAT GCAGCTCAGG CGGGTGTGCA GTTAGAGCAT ATTCAATCTA ACGCCGAGCA CTTACTTATC GAGGCGATTC ATAACAGTGA CGCCGATATG GTGATCATCA ACCCGGCGGC TTTTACCCAT ACCAGCGTTG CATTGAGAGA TGCCCTACTT GGTGTCGCAA TCCCTTTTAT TGAGGTGCAC CTTTCCAACG TGCACAGCCG TGAGCCTTTC CGCCACCACT CCTACTTTTC AGATAAAGCC ATAGGGGTGA TCTGTGGCTT AGGTGCTCAA GGCTATCAAT TTGCGCTACA AGCCGCGATT GCACGTATTA ATGCGGCAGA TAAATAA
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Protein sequence | MSQPKILLVN GPNLNLLGRR EPGHYGHHTL EQIVDELKQN AAQAGVQLEH IQSNAEHLLI EAIHNSDADM VIINPAAFTH TSVALRDALL GVAIPFIEVH LSNVHSREPF RHHSYFSDKA IGVICGLGAQ GYQFALQAAI ARINAADK
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