| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0399 |
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| Symbol | |
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| ID | 5660799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 481557 |
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| End bp | 482867 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641234933 |
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| Product | ATP-dependent RNA helicase RhlB |
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| Protein accession | YP_001500262 |
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| Protein GI | 157960228 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAA CACATTTATC TACACAAAAG TTTGCTGACT TCCCTTTACA TAAAGAAGTA
CATCAAGCAC TTAACGAAGC TGGATTCGAG TTTTGCACCC CAATCCAAGC TTTGTCGTTA
CCGATTTTAT TAGAAAAAAA AGATATAGCG GGTCAGGCAC AAACAGGTAC GGGTAAAACT
CTGGCCTTTC TAGTCGCCAC TTTTAACCAC CTTCTGTCTA CGCCAATCCC AGCCGAACGC
CAACTAAATC AACCTCGCGC AATTATTATG GCGCCGACTC GAGAGTTGGC GATTCAAATT
GCTAAAGATG CGAATCTACT GGCTAAGCAT ACTGGTCTTA AAGTCGGTAT CGTTTACGGC
GGTGAAGGCT ACGAAGTTCA ACGCAAAGTA TTAGATAAAG GCGTTGATAT ATTGATTGGT
ACCACAGGCC GCATTATTGA TTATGTGCGT CAAGGTGTGA TCAATGTTAG TTGTATTCAA
GCAGTGGTAC TTGATGAAGC GGATCGCATG TTCGATTTAG GCTTTATTAA GGACATCCGT
TTCTTGTTTA GACGTATGCC TGATGCTAAA TCACGCTTGA ATATGCTGTT CTCTGCAACG
CTTTCAATGA AAGTGCAAGA ACTTGCTTAT GACCACATGA ATGAGCCTGA AAAAGTTGAG
ATCGCGCCAA ACGAGAAAAC ATCAAAGAAT ATTAAAGAGG AAATCTTCTA TCCATCGATG
GAGGAGAAGA TGCCTTTGCT ATTGTCTTTG CTTGAAGAAG ACTGGCCAGA AAAAGCCATC
GTGTTTTCTA ATACCAAACA CAGCTGTGAG AAAGTATGGT CATGGCTTGA AGGTGATGGC
CATCGCGCAG GCCTGCTAAC GGGTGATGTG CCGCAGAAGA AACGTTTACG TATTCTTGAG
CAATTTACTA AAGGCGACAT CGATATCTTA GTTGCGACCG ACGTTGCGGC GCGTGGCTTA
CATATCTCTG ATGTGTCACA TGTTTATAAC TATGACCTGC CAGATGATTG TGAGGACTAC
GTGCACCGTA TCGGTCGTAC TGGTCGTGCG GGTCAAAAAG GGGTATCAGT CAGCTTTGCT
TGTGAAGAGT ACGCGTTGAA CCTGCCTGCT ATCGAGTCGT ATATTCAGCA CTCAATTCCA
GTGACATCTT ATGACAGCGA TGCACTACTT GATGATATTC CACCACCGGT GAGAATTCAT
CGTAAGCCTA GTACCCATAC GCGAAATACT CGTGATCGTA GTTCTGGTCG TCCACAGGGT
GGGCAGCGCA ATGGACCTCG ACGTCATGAC AAAACGCGTA GACATTCGTA G
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| Protein sequence | MSETHLSTQK FADFPLHKEV HQALNEAGFE FCTPIQALSL PILLEKKDIA GQAQTGTGKT
LAFLVATFNH LLSTPIPAER QLNQPRAIIM APTRELAIQI AKDANLLAKH TGLKVGIVYG
GEGYEVQRKV LDKGVDILIG TTGRIIDYVR QGVINVSCIQ AVVLDEADRM FDLGFIKDIR
FLFRRMPDAK SRLNMLFSAT LSMKVQELAY DHMNEPEKVE IAPNEKTSKN IKEEIFYPSM
EEKMPLLLSL LEEDWPEKAI VFSNTKHSCE KVWSWLEGDG HRAGLLTGDV PQKKRLRILE
QFTKGDIDIL VATDVAARGL HISDVSHVYN YDLPDDCEDY VHRIGRTGRA GQKGVSVSFA
CEEYALNLPA IESYIQHSIP VTSYDSDALL DDIPPPVRIH RKPSTHTRNT RDRSSGRPQG
GQRNGPRRHD KTRRHS
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