Gene Spro_3019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3019 
Symbol 
ID5604041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3324102 
End bp3324584 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content48% 
IMG OID640938560 
Producthypothetical protein 
Protein accessionYP_001479248 
Protein GI157371259 
COG category[S] Function unknown 
COG ID[COG3157] Hemolysin-coregulated protein (uncharacterized) 
TIGRFAM ID[TIGR03344] type VI secretion system effector, Hcp1 family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTG ACTCATTTCT GAAGGTTGAC GGGGTTACTG GCGAATCTAA TGATTCGAAT 
CACAAAAATT GGACTGATAT TCTGTCATTC AACTGGGGGG CGACCCAGTC TGGCAATATG
GCCGTAGGCG GTGGCGGCGG GACGGGGAAA GTAAACTTCA AGGATTTGGA GGTGCAGGCA
CTTATCGATA AATCTACACC GGCCATTCTG AAGTTTTGCT CCAGCGGTAA ACATGTAACC
AAAGTAGAAC TTTCTATCTG CAAGGCCGGG GGCACCCAGG TCGAATATAC CAGGATCGTG
CTGGAAGATG TCCTGGTCAG TATGGCGGAC TTTACCGGTG TTGGGCACAC CGACAATATC
CTGGTTAAAT ATCGTTTTCA GGCTTCCAAG GTCAATCTGC ATTACTGGGA GCAAAGCGCC
AGCGGCACCA AGGGTGCAGA AACCAAAGCC GGTTGGGATA TTAAACAGAA TAAAGAGATT
TAA
 
Protein sequence
MAIDSFLKVD GVTGESNDSN HKNWTDILSF NWGATQSGNM AVGGGGGTGK VNFKDLEVQA 
LIDKSTPAIL KFCSSGKHVT KVELSICKAG GTQVEYTRIV LEDVLVSMAD FTGVGHTDNI
LVKYRFQASK VNLHYWEQSA SGTKGAETKA GWDIKQNKEI