| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1909 |
|---|
| Symbol | |
|---|
| ID | 5606460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 2092673 |
|---|
| End bp | 2093470 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640937445 |
|---|
| Product | 4-amino-4-deoxychorismate lyase |
|---|
| Protein accession | YP_001478140 |
|---|
| Protein GI | 157370151 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
|---|
| TIGRFAM ID | [TIGR03461] aminodeoxychorismate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000472984 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000000690882 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGTACTGGA TCAATGGACA TCAGCACGAT GCGCTAGCGC CAAGCGATCG CGGTTTGCAG
TTTGGTGACG GCTGTTTCAC TACCGCCCGG GTGATTGAGG GGAAAATAGA CCTGCTGCCC
TGGCATATCG AGCGGCTGCA GTTGGCAGCG CAACGGCTGA TGCTGCCGTC CTGCGACTGG
AACGCTTTGG AAGATGAAAT GGTGCGCGCG GCAGAATCTA TCCCATTGGG CGTGGTCAAA
GCGATACTGA CTCGCGGCAG CGGTGGCAGG GGGTACAGCC CGCAAGGGTG TGAGGCTCCC
ACACGCATAG TCTCTCGTAG CACCTACCCC ATGCACTATT TGCCATGGCG AGAGCAGGGC
ATCAGCCTGA CGCTCAGCCC GGTAGCGCTG GGACGCAATC CCCTGTTGGC TGGGCTAAAG
CATTTGAATC GTTTGGAGCA GGTGTTGATC CGCACGCATC TTGACCAGAC AACCGCCGAC
GAGGCGCTGG TGCTTGACAC TGCCGGTATG CTGGTGGAAT GCTGTGCGGC TAATTTGTTC
TGGCGTAAGG GGAAAGCGGT ATTTACGCCA GATTTGAGCC AGGCAGGCGT GGCTGGGCTG
ATGCGTCGCC GGGTTATTGA GCTGCTGGCG GGCAGTGAAT ACTCGCTGCA TTGCGTCAGC
GAACCTCTAG AGACGCTGGC CGATGCCGAA GAAGTGCTGG TGAGCAATGC GTTAATGCCG
TTGCTGCCGG TCAATACTGC GCAATCATGG CGTTACCCTT CGCGCCAACT TTATGATTTT
TTGCGCCCAC ACTGTTAA
|
|---|
| Protein sequence | MYWINGHQHD ALAPSDRGLQ FGDGCFTTAR VIEGKIDLLP WHIERLQLAA QRLMLPSCDW
NALEDEMVRA AESIPLGVVK AILTRGSGGR GYSPQGCEAP TRIVSRSTYP MHYLPWREQG
ISLTLSPVAL GRNPLLAGLK HLNRLEQVLI RTHLDQTTAD EALVLDTAGM LVECCAANLF
WRKGKAVFTP DLSQAGVAGL MRRRVIELLA GSEYSLHCVS EPLETLADAE EVLVSNALMP
LLPVNTAQSW RYPSRQLYDF LRPHC
|
|---|
| |