| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1053 |
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| Symbol | |
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| ID | 5606704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 1158265 |
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| End bp | 1160778 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640936572 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_001477285 |
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| Protein GI | 157369296 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0292471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAAC AACGCACTAC AGGAATAAAA CCGCTGAGGA TGATGATACT GACCGCACTG
GCGTTGTCGC CGGCGGTACA GGCGCGGGAC TATTTCAACC CGGCCCTGCT GGAGCAGGGC
GACGCCCGCC AAAGCCAGAC CGACCTGTCG GTGTTTGAAG ACGCCGGCGG ACAGCCCCCC
GGCACCTATC GGGTGGATAT CCTGCTCAAC GAACGCCTGA CCGAGACCCG GATGGTCACC
TTCAGCGCCG CCCCCGACGG CCTGCAACCC TGCCTGAGCG TGGCCGACCT GGCCGACTGG
GGGGTGCGAA CCGCCCTGTT CCCGGCGCTT GGCAGCGCAG ACAGCCGCTG CGCCAATCTG
GCCGCCATTC CCCAGGCGTC GGCGCAGCTG CGTTTCAGTC AGCAGCAGCT GGTGCTGAGC
ATTCCCCAGG CGGCCATGAC GCCGCAACCG CGCGGTTATG TGCCCTCGTC ACAATGGGAC
GAGGGTATCC CGGCGCTGAT ACTCAATTAC AGCCTGACCG GCGCAGACAC CACCGCCCGC
GGCAGCGGTC GGGGTAGCGA CAGCAACAGC CAGTTCGCCA ACCTGCGTCC CGGCCTGAAC
GCCGGCCCCT GGCGCTTGCG CAACTACACC ACCTGGCGCC GCAGCAGCGA CGGCAAGGAT
AAATGGGACA CGGTCTACAC CTACGCGCAG CGCAACCTGA TTGGCCTGCA AAGCCAGTTG
ACCCTGGGCG ACAGCAATGC CCCGGCCGAG GTGTTTGACG CCGTGCCCTT TCGCGGCGTG
CAGCTGGCCT CGGATGACGA GATGCTGCCC GACAGCCTCC GCGGTTACGC CCCGGTGGTG
CGTGGCATCG CCCGCACCAA TGCCCAGGTG GTGGTGCGCC AGAACGGCTA TGAAATCTAC
CGCACCTTTG TGGCCCCCGG CGCCTTCGTG ATTAACGACA TGTACCCCAC CGGCGGCAGC
GGTGACCTGC AGGTCACCAT CAAGGAAGCG GACGGCAGCG AACAACAGTT GGTGGTGCCC
TTCGCCTCGC TGCCGGTGCT GCAGCGGGAA GGCCGACTCA AATACAGCCT GACCGGCGGC
CAGTACCGCA GCTATGACCG CAGCGTGGAT AAAAGCGCCC TGGTGCAGGG CACCGCGATT
TACGGCCTGC CGTGGAACAC CACGCTGTAC GGCGGCGTGC AGGCGGCGCA ACACTACCAG
TCGGCGGCGC TGGGGCTGGG CAACAACCTC GGTGAGTGGG GCGCGTTCTC CGTGGACATG
ACGCAGTCGC GCAGCCAGCC GAAAGACCAG GACAGCGCCA CCGGCCAGTC ATGGCGGGTA
CGCTACAGCA AGAATCTGGT GCAGACCGGC ACCAACTTCG CCATCGCCGG TTACCGCTAC
TCCACCGCGG GGTTCTACTC GCTGGCAGAA GTACTGGACG GCTGGCGCAG CAGCAGCACG
CCGTTCTGGC AGAACGAACG GCGGCGCAAC CGGGCCGAAC TGAGCATGAA CCAGCAGCTG
GGGCCGCAGG CGGGCAGCCT GTCGCTGAGC GCGGTGCGGG AAGACTACTG GAACAGCGAA
CGCAGCCTCG CGTCACTGGG GCTGGGCTAC AGCAACAGCT GGCGCGGCAT CAGTTACGGC
GTCAACTGGA GCTACAACCG TAACACCCAG GGTGCCACCC GCAGCAACGA CCAGCAGATA
GCGCTGAACC TCAACGTGCC GCTGAACCTG TGGGACAACA ACAACGCCTG GGTCAACTAC
GGCCTTAACA GCACCAAGGG CGGCGCGACC AGCCACAACC TGGGGCTGAG CGGCGTGGCA
CTCCGTGACA ACAGCCTGAG CTGGGGCGTG CAGCAGACCT ACGGCAGCCG GGGCCAGGGC
TACGGCGGCA ACAGCAATCT GGACTACCGC GGCACCTACG GCGAAGTGAC TGCCGGTTAC
GGCTATGACA AAGACAGCCG GCGCCTGAAC TACGGGCTGC AGGGCAGCGT GGTGGCGCAC
CAGAACGGCA TCACGCTGGG CCAGCCGCTG GGGGAAACCG CCGCGCTGGT AGCGGCCCCG
GGCGCGCCGG GGGTGAGCGT GAGCAACCAG ACCGGGGTGC GTACCGACTA CCGCGGCTAC
GCGCTGGTGC CCTACCTGAC GCCGTACCGC AACGGCAATG TGGCGCTGAA CCCGGAAACG
CTGCCGACGG ACGCGGAGAT TGAACAGAAC AGCCAGCGGG TCACCCCAAC GCGGGGCGCG
CTGGTCCGCG CCACCTTTAC AGCCAAAGTG GGTGCACGAG TGCTGATGAC CTTAACCCAG
GCCGATGGCC GCCCGGTACC CTTTGGTGCC ACGGTCAGCG AGACCGACCA AAATGCGGCC
CAGGGCAGCA TCGTCGGCGA CAGCGGCCAG GTGTACCTGA GTGGCCTGGC CGACAGCGGC
AGCCTGCGGG TGAAATGGGG CAACGGCAGC GGCGGAGAAT GCCGGGTTAA TTATCGGCTG
CCAACAGGAG CCCCTGTTGG GGGCATCATG CAGATAGAGG GAATCTGTCG ATGA
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| Protein sequence | MQQQRTTGIK PLRMMILTAL ALSPAVQARD YFNPALLEQG DARQSQTDLS VFEDAGGQPP
GTYRVDILLN ERLTETRMVT FSAAPDGLQP CLSVADLADW GVRTALFPAL GSADSRCANL
AAIPQASAQL RFSQQQLVLS IPQAAMTPQP RGYVPSSQWD EGIPALILNY SLTGADTTAR
GSGRGSDSNS QFANLRPGLN AGPWRLRNYT TWRRSSDGKD KWDTVYTYAQ RNLIGLQSQL
TLGDSNAPAE VFDAVPFRGV QLASDDEMLP DSLRGYAPVV RGIARTNAQV VVRQNGYEIY
RTFVAPGAFV INDMYPTGGS GDLQVTIKEA DGSEQQLVVP FASLPVLQRE GRLKYSLTGG
QYRSYDRSVD KSALVQGTAI YGLPWNTTLY GGVQAAQHYQ SAALGLGNNL GEWGAFSVDM
TQSRSQPKDQ DSATGQSWRV RYSKNLVQTG TNFAIAGYRY STAGFYSLAE VLDGWRSSST
PFWQNERRRN RAELSMNQQL GPQAGSLSLS AVREDYWNSE RSLASLGLGY SNSWRGISYG
VNWSYNRNTQ GATRSNDQQI ALNLNVPLNL WDNNNAWVNY GLNSTKGGAT SHNLGLSGVA
LRDNSLSWGV QQTYGSRGQG YGGNSNLDYR GTYGEVTAGY GYDKDSRRLN YGLQGSVVAH
QNGITLGQPL GETAALVAAP GAPGVSVSNQ TGVRTDYRGY ALVPYLTPYR NGNVALNPET
LPTDAEIEQN SQRVTPTRGA LVRATFTAKV GARVLMTLTQ ADGRPVPFGA TVSETDQNAA
QGSIVGDSGQ VYLSGLADSG SLRVKWGNGS GGECRVNYRL PTGAPVGGIM QIEGICR
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