Gene Spro_0550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0550 
Symbol 
ID5606761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp608628 
End bp609491 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content60% 
IMG OID640936057 
ProductRpiR family transcriptional regulator 
Protein accessionYP_001476784 
Protein GI157368795 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGTTG AAATCGACAT TATCTCGCGC ATTACGGAGC GTTTTATCGA GCTGAGCAGC 
GCCGAAAAAC GCATCGCACA ATTCATTCTG GATGATGCGG AGGCGGTGAC TGCCCTGCCG
ATTGCCGAAT TGGCCCGGCA GGCTAACGTT AGCCAGGCTT CGATCACTCG TTTCGCCAAA
GCGCTGGGCT GCCGGGACGT GCGTGACCTT AAGGTCAAGC TGGTGCAGTC GCTGGCGGTG
GGGCAACGCT TCATTCACGA AGAGCCGGAC CTCGAAGGAA TTCAGGGGAT TTATGAAAGC
ATCATCAATG TCCTGAATAT AAATCGGCGG AGCCTCGATG ACGCAGCGCT GGCCAAGGCG
GTGGAGTTAC TCAGTGGTGC ACGACAAATT GTGGCGATGG GTATGGGCGG CGGCTCGACC
CTCTGCGCAG CAGAGATCCA GCATCGGCTG TTTCGTCTGG GGTTGCCGGT GACGGCACAA
AGTGATGGCT TGCTGGTGCG CATGATGGCG GCGGTGGTGA GCCGGCAGGA TGTGGTGGTG
GCGCTGTCAC TGGGCGGCTA CACGCAGGAA GTGGTGGAAA GTGCCGCCAT TGCCCGCCAG
TACGGGGCCA AAGTGGTGGT GATTGCTCCC GCCGGAACGC CACTGGCGGC GCAGGCTGAC
GTGCTGTTGG CGTTGGTGGT GCAGGAAAAT GATTACATCT ACAAACCCAG CAGCTCGCGC
TACGCCATGC TGGCGATGGT GGACGTGCTG GCGACGGCGC TGGCCATGGC AAATAAACGC
CAGTCCAGAG ATCGGCTACG CCGCATCAAG CTGGCGCTGG ACAGCCATCG CGGAGGGGCC
GATCGGCAAC CATTGGGTGA CTGA
 
Protein sequence
MGVEIDIISR ITERFIELSS AEKRIAQFIL DDAEAVTALP IAELARQANV SQASITRFAK 
ALGCRDVRDL KVKLVQSLAV GQRFIHEEPD LEGIQGIYES IINVLNINRR SLDDAALAKA
VELLSGARQI VAMGMGGGST LCAAEIQHRL FRLGLPVTAQ SDGLLVRMMA AVVSRQDVVV
ALSLGGYTQE VVESAAIARQ YGAKVVVIAP AGTPLAAQAD VLLALVVQEN DYIYKPSSSR
YAMLAMVDVL ATALAMANKR QSRDRLRRIK LALDSHRGGA DRQPLGD