Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0213 |
Symbol | |
ID | 5605868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 240272 |
End bp | 241024 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640935704 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_001476451 |
Protein GI | 157368462 |
COG category | [K] Transcription |
COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00305368 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGCCTGA CGATTAACGA CCACATTGGC TATTTTCCTC CCTTCAACTG GCAGGAGATT TACGACACCA CCCGTCAAAA CAGTCTGCCC AACGTGGTGC TTGGGCAATG TCCGAATGTC GGAAGCACCG TACTGCTGGA GCCTCAACAC CATGAGCACG CTGTTAACTG GCTCCCGCTC TTATGGCAGC TGGTAATATT GAAATCTTGC AGGCCCGACC TAAAGCTGGC TCTCAGCGCC CCTTTTTCGG CCCCAAACTG GCACCGGCTG CTGGCCGCAC TGGGCATCAC CCCCCTGGAG GGCAACGTAA CGCCATCGCC CCCCACACCA CAGTTGACCC TGACGGAAAG CCAGGTGTTA TTGACGTTGC TGGACGGTAC CCATACCCAG CAGTTGGCAT CCCGCCTAAA CCGCGACATA CGCACCGTTT CCAGTCATAA AAAACGGGCG ATGGATAAGG TGGGGTTGCG GCACAACGGC GAGCTGTATG CGCTGGGTGC CTTGCTTTAC GACCGAGAAT ACACCATGCC TGCCGTCTTC TTGCCCCCGG CGGAACAACG GGTGCTGGCC AGCCTGCTGC ATAATGGCAG CGTCACGGCC ACCGCACGCT TGTTAGGGAA AAGCGTCAAG ACCGTCAGCG GCCAGAAGCT CAACATTATG AGGCGATTCG GCGTACCCCA TGAAGTGGCG CTGTTTGCAG TCGCCGTGAC GCAGCAAGGC ACGACGGGGA ACTTTTATCG GGTTCTGCCG TAA
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Protein sequence | MRLTINDHIG YFPPFNWQEI YDTTRQNSLP NVVLGQCPNV GSTVLLEPQH HEHAVNWLPL LWQLVILKSC RPDLKLALSA PFSAPNWHRL LAALGITPLE GNVTPSPPTP QLTLTESQVL LTLLDGTHTQ QLASRLNRDI RTVSSHKKRA MDKVGLRHNG ELYALGALLY DREYTMPAVF LPPAEQRVLA SLLHNGSVTA TARLLGKSVK TVSGQKLNIM RRFGVPHEVA LFAVAVTQQG TTGNFYRVLP
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