| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0054 |
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| Symbol | malS |
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| ID | 5607291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 53931 |
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| End bp | 55997 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640935539 |
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| Product | periplasmic alpha-amylase precursor |
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| Protein accession | YP_001476292 |
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| Protein GI | 157368303 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.308839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCC TGACCCTTCC CCTGTTGATG CTGCTGTCAC CGGCGGCAAT GGCGAGCTGG
ACGCTGCAAA GCTTCCCGGC CTTTGACGAG TCCGCCAGCG GCTTGTTCAC CAGCCACGCC
ACGTTGGCCA AGGGCGAACT GCCGCTGAAG ATTTACCAGA ACCAACAGTG CTGGCAGCCG
ACCACGGCGG CCAAACTGAA TCAAGCCCTG TCACTGCAAC CTTGCGGCGA TAACCCACCG
GTTAACTGGC GGTTGTTCCG CGCAGGCGAA TATCAGGTGC GCATCGACAC CCGCAGCGGT
ACACCAACGT TGCAGCTCAG CCTGAAAACC GCACCGGAAA TCGCCGCCTC TGCGGTAGCG
CGCACCTGCC CACGCTGGAA CGGCTTGCCG GTCACTCTTG ACGTGGCGGC AACCTTTGCC
GAAGGTGAAA CGGTGCGTGA TTTCTATTCT GGCCAAACGA CCAATGTCAG CCAGGGCAAA
GTCACCCTGC AACCGGCCGC AGGCAGCGGG GGGTTACTGT TGCTGGAGTC GGCAAGCAAC
GAGAAAGCCG CGCCGTTCAA CTGGCACAAC GCCACGGTCT ACTTCGCCCT CACCGATCGC
TTTGAAAACG GCAACCCGGC CAACGACCAC AGCTACGGCC GCCGCAGCGA CGGCATGCAG
GAGATAGGCA CCTTCCACGG CGGCGATTTG GCCGGCCTGA CGAAAAAGCT CGATTATCTG
CAACAGCTCG GCGTCAATGC GCTGTGGATC AGTTCGCCGC TGGAGCAGAT CCACGGCTGG
GTTGGTGGTG GCACCAAAGG CGACTTCCCG CATTACGCCT ATCACGGATA CTACGCGCTG
GACTGGACCC GGCTCGATGC CAACATGGGC AGCGAGCAAG ATCTGCGCAC GCTGGTCGAG
CAAGCGCACC AGCGTGGTAT CCGCATCCTG TTCGACGTGG TGGTGAATCA CGTCGGTTAC
GCCACGCTGG CGGATATGCA GACCTTCCAG TTCGGCTCGC TGTATCTGAA AGGTGCAGAG
ATCGAAAAAA CACTGGGTAA AAACTGGGGC GACTGGCGGC CGGGCACAGG ACAAAACTGG
CACAGCTTCA ACGATTACAT CAACTTCAGC GATAAGGCCG GCTGGGACGC CTGGTGGGGT
AAAAACTGGA TCCGCACCGA TATAGGCGAC TACGATCCAC CGGGCTATGA CGACCTCACC
ATGTCGCTGG CCTTCCTCCC GGACATCAAA ACTGAAGCGT CCGGCGCCAG CGGTCTGCCG
CTGTTTTATC GCCATAAACC CGACACCGCT GCGCACGAAA TCCCCGGAGC TACTCCCCGC
GACTACCTGA CTACCTGGCT CAGCCAATGG GTACGCGATT ACGGCATTGA CGGCTTTCGC
GTCGATACCG CCAAGCACGT GGAGAAACCG ACGCTGGCGC TGCTGAAACA GCGTGCCACG
GCGGCGTTGG CCGAGTGGAA AGCCGCTCAT CCGCAACAGG CACTGGATAA CGCCCCATTC
TGGATGACCG GTGAAGCCTG GGGCCATGGC GTGATGAAAA GTGACTATTA CCAGAACGGC
TTCGACGCGA TGATCAATTT TGATTTCCAG GATCAGGCGT CGCAGGCGCT GAGCTGCTTC
TCCAGCATCG ACACCACCTA TCAACAGATG GCCGACAAGT TGCAGGATTT CAACGTGTTG
AGCTACATCT CTTCGCACGA TACCCGGCTG TTCTTTGCCA GTGATGCCAA AGGGTCGCTG
GCACTGCAGC AGCGCGCCGC CGACCTGCTG CTGCTGGCCC CCGGCGCGGT ACAAATTTAC
TACGGTGATG AAAGTGGCCG TCAGCTTGGC CCGAGCGGTT CAGACCCGTT GCAGGGCACC
CGTTCCGATA TGAACTGGAG TGAGCTGCAG GGCGACAAAG CCCCACTGCT GGCGCACTGG
CAGCGGCTGG GTCAATTCCG CGCTCGTCAC CCGGCAATCG GTGCGGGTAA ACAGCAGTCG
CAACAAACGG CGCAATACTA CGCCTTCAGC CGCCGGCTCA GCGACGATAA GGTGATGGTG
GTGTGGGTCG GCGATCGGTC ACAATAA
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| Protein sequence | MKRLTLPLLM LLSPAAMASW TLQSFPAFDE SASGLFTSHA TLAKGELPLK IYQNQQCWQP
TTAAKLNQAL SLQPCGDNPP VNWRLFRAGE YQVRIDTRSG TPTLQLSLKT APEIAASAVA
RTCPRWNGLP VTLDVAATFA EGETVRDFYS GQTTNVSQGK VTLQPAAGSG GLLLLESASN
EKAAPFNWHN ATVYFALTDR FENGNPANDH SYGRRSDGMQ EIGTFHGGDL AGLTKKLDYL
QQLGVNALWI SSPLEQIHGW VGGGTKGDFP HYAYHGYYAL DWTRLDANMG SEQDLRTLVE
QAHQRGIRIL FDVVVNHVGY ATLADMQTFQ FGSLYLKGAE IEKTLGKNWG DWRPGTGQNW
HSFNDYINFS DKAGWDAWWG KNWIRTDIGD YDPPGYDDLT MSLAFLPDIK TEASGASGLP
LFYRHKPDTA AHEIPGATPR DYLTTWLSQW VRDYGIDGFR VDTAKHVEKP TLALLKQRAT
AALAEWKAAH PQQALDNAPF WMTGEAWGHG VMKSDYYQNG FDAMINFDFQ DQASQALSCF
SSIDTTYQQM ADKLQDFNVL SYISSHDTRL FFASDAKGSL ALQQRAADLL LLAPGAVQIY
YGDESGRQLG PSGSDPLQGT RSDMNWSELQ GDKAPLLAHW QRLGQFRARH PAIGAGKQQS
QQTAQYYAFS RRLSDDKVMV VWVGDRSQ
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