| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4069 |
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| Symbol | |
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| ID | 5610192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4982465 |
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| End bp | 4983067 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640935024 |
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| Product | two component Fis family transcriptional regulator |
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| Protein accession | YP_001475801 |
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| Protein GI | 157377201 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACTAA CTAATTCACA AGCTAAGTCA AAAACTAAGC CACAAGCCTG CTCGCTATCT
AAGTCGAAAA AGCTGTTGAT CATCGAAGAC GATCTGGCTC TGGCCGGGGT ATTGGCGAGA
CGCTTAACGC GTCAGGGATT CGAGTGTCAG CAAGCCCATG ATGTGACACA AGGCTTGCTG
CTTGCGAGGC AGTTTCAACC CAGCCATATT CTGTTGGATA TGAAATTAGA CGAAGACAAC
GGTTTGTCCT TGATTGAGCC GCTACGTAAG AGTTTGCCTG ATGTCACTAT GGTGCTATTG
ACCGGTTACG CCAGTATTGC CACCGCCGTG GAAGCCATCA GGATGGGCGC CGATAACTAT
CTGGCGAAGC CGGTCGATAC ACAAACCCTG CTCAGAGCAC TGGATACTGC CCCTGTCGAC
ATGGATGTTA AGAGTGTAGA TGAGGTGCCA CTGAACCCTA AACGCGTCGA GTGGGAGCAT
ATTCAGCAGG TGTTGAATGC GAACAAGGGC AATGTCTCGG CAACCGCTCG TCAGCTGGGC
ATGCATAGAA GAACATTGCA GCGAAAACTG CTTAAGAAGC CTGCTGTTGA CCATAGGGCT
TAA
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| Protein sequence | MSLTNSQAKS KTKPQACSLS KSKKLLIIED DLALAGVLAR RLTRQGFECQ QAHDVTQGLL
LARQFQPSHI LLDMKLDEDN GLSLIEPLRK SLPDVTMVLL TGYASIATAV EAIRMGADNY
LAKPVDTQTL LRALDTAPVD MDVKSVDEVP LNPKRVEWEH IQQVLNANKG NVSATARQLG
MHRRTLQRKL LKKPAVDHRA
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