Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_4013 |
Symbol | |
ID | 5611918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 4913292 |
End bp | 4913867 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640934968 |
Product | FxsA cytoplasmic membrane protein |
Protein accession | YP_001475745 |
Protein GI | 157377145 |
COG category | [R] General function prediction only |
COG ID | [COG3030] Protein affecting phage T7 exclusion by the F plasmid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000000110243 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | GTGTTTTTCT TTCTATTAGT TATCTTCATC TTAGTTCCGG TTATAGAGCT AAACGTACTG ATCCGTGTCG GTGAGTCGTT CGGGAGCTGG ACCACCATCG GTTTGGTCTT CTTCACTGCT ATTGTCGGCG TCTCTTTGGT TCGTAGCCAA GGGATCACGA CACTAATGCA GGTGCAGCAA AAACTTTCAC GAGGCGAAGC ACCCGGTCAG GAGATTGTCG AAGGGATGAT GCTGGCCGTT GCCGGCCTGC TGTTACTTAT CCCAGGATTT GTTACCGATG CCATTGGATT ACTGCTGCTG ACTCCCTTGA CCCGCATCCC CGTTGCCGGC TTTCTTTACA AGCGAATGCA GATGAGAGTG GTCAATAATG GTGGCTTTCA TGGCGGCTTC GGTCCCGGGG GCAATGGTGC TCAAGGTCCC TTTGGCGGTC ATCAGCCATT TGATGATAGT AAGAGCAAGA ACCCTGAAGG CGGAGATACA TTCGACGGTG ATTTTGAGCA TAAGCATGAT CCCAGCGACA AGCGTCCGGA AAGCCATCAG ATAGATGATA AAGAAGATAA AAATCCTAGG AACTAG
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Protein sequence | MFFFLLVIFI LVPVIELNVL IRVGESFGSW TTIGLVFFTA IVGVSLVRSQ GITTLMQVQQ KLSRGEAPGQ EIVEGMMLAV AGLLLLIPGF VTDAIGLLLL TPLTRIPVAG FLYKRMQMRV VNNGGFHGGF GPGGNGAQGP FGGHQPFDDS KSKNPEGGDT FDGDFEHKHD PSDKRPESHQ IDDKEDKNPR N
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