Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2127 |
Symbol | |
ID | 5610660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 2574152 |
End bp | 2576665 |
Gene Length | 2514 bp |
Protein Length | 837 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640933030 |
Product | cell division protein FtsK/SpoIIIE |
Protein accession | YP_001473864 |
Protein GI | 157375264 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1674] DNA segregation ATPase FtsK/SpoIIIE and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000271124 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0651093 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCTAAGG GAAATAGTAT TAAAACGCTA AGCGGAGTGC AGCGTCTTCT AGAGGGGGGC CTCATTATTT GTTGCATGCT AGCAACTTAT GTTCTTCTTG CCCTCAGTAG TTTTTACTCT TCCGATCCGG GTTGGAGTCA ATCACATTTC GAAGGTGAAA TTCAAAATGT TACCGGTGCG GTAGGAGCAT GGACAGCGGA TGTGTTGTTC TACTTTTTCG GTTACACCGC TTACCTTATT CCAATCATTA TGGCGTTGAC GGGCTGGTTG CTTTTTAAAC GTACCCACAA GCTACTCGAG ATTGATTACT TTTCGGTAGG GTTAAGGCTC ATTGGTTTTC TGCTCATTGT TTTCAGTTTA GCCGCCCTTG CCAGCATGAA TGCTAATGAT ATCTATGAAT TTTCTGCCGG AGGTGTCGCC GGGGACGTGA TCCGCGATGC CATGTTGCCT TATTTTAATA AATTAGGTAC CACTCTATTG CTGCTTTGTT TTGTTGGAGC AGGTTTTACA CTACTCACCG GGATTAGCTG GTTAACGATT GTCGATTTAA CGGGGTTTTC CGCTATTTGG GTTTTCAACT CACTACGTTC GCTACCCGAA CGCTTTAAAC GTGACTCTGG TGAAACCGAA GATACACAAG GCTTCATGTC TGTATTCGAT AAATTCAAAG AGAAACGCAA TCAATCGGAA GATGATTTTG AAGATGAAGA GCTTGATTCC GAACGTTTAG ATACTCACTT GAATCAATTT GAAGAGCTAA ATCACGGTGA ACAGCTAAAC ACAAACAGTC GTATCGAGCC ACAACTTGAA AGTGAAGAGG ATGCTATCGA TGATGAGGTC CACCTGGCCC CGTCTGCCAC AGCTCCGGAA ACTGAACTCG ATGAAATTGA TTTTGACAGT CAGACATCAG TTGGCGCTGT AAGCCTTGCT AAACCTAAGG TTGTCGAGTC CGCTAAAATC GTTGATGGTA TTGTGGTTTT ACCAGGGCAA GATCTCGAGC AGGCAAAGAA ACCCATTACT CCGCTGCCAA GCATCTCTCT GTTAGATGTC CCAAATAGGA AGGCTAATCC TATCAGCCGT GAAGAGTTAG AGCAGGTTGG GGCGCTGGTA GAGGTTAAAC TTGCCGATTT TAATATCGTA GCAAAGGTTG TTGGGGTTTT CCCCGGGCCT GTTGTTACCC GATTCGAGCT AGAGTTAGCG CCTGGCGTTA AAGCATCTAA AGTCACCAAC CTTTCTAAAG ATTTAGCACG CTCTCTATTG GCTGAAAGTG TTCGAGTTGT AGAAGTGATC CCTGGCAAGG CCTATGTCGG CATCGAATTA CCTAATAAGT TTCGTGAAAC CGTATTTATG CGAGATGTGT TGGACAGTAA AACATTCGCA GAGAGTAAGT CTCATTTGAG CATGGTGTTA GGTCAGGATA TTGCCGGTGA GCCGGTCGTT GTCGACTTGG GCAAAATGCC ACATCTCCTG GTAGCCGGTA CGACGGGTTC GGGTAAGTCA GTCGGTGTGA ATGTGATGAT CACCAGCTTG CTGTATAAAT CCGGACCTGA TGATGTTCGT TTTATCATGA TCGATCCTAA GATGCTTGAA CTCTCAGTTT ATGAAGGGAT CCCGCATCTT CTTTGTGAAG TCGTTACCGA TATGAAAGAA GCGGCAAACT CGCTTCGATG GTGTGTGGGT GAGATGGAGC GTCGATATAA GCTGATGTCA GCCCTTGGGG TTCGAAACCT GAAAGGTTAC AACGCGAAAA TCAAAGAGGC GAAAGAATCA GGCCAACCTA TCACAGATCC CTTATGGAAA TCTTCAGATA GCATGGAGCC TGAAGCTCCG GAATTGGATA AGCTCCCATC TATTGTGGTC GTGGTGGATG AGTTTGCCGA CATGATGATG ATTGTGGGTA AAAAAGTAGA AGAACTCATC GCCCGAATCG CTCAAAAAGC ACGTGCCGCA GGCATTCATT TGATACTTGC AACACAACGA CCTTCTGTCG ATGTGATCAC GGGTCTGATT AAGGCCAACA TTCCAACCAG AATGGCGTTC CAGGTATCGA GCCGTATCGA CTCTCGTACT ATCTTAGACC AGCAGGGAGC CGAAACCCTG TTGGGGATGG GTGATATGCT CTATCTGCCA CCAGGGACCA GTATACCCAT TCGTGTTCAT GGTGCGTTTA TCGATGATCA TGAAGTTCAT GCTGTCGTGG CCGATTGGCA TAGTCGAGGC AAACCGCAAT ATATCGATGA GATCCTGCAG GGCTCGACCG AAGGGGAGCA GGTATTGTTA CCCGGAGAAG CCAGTGATGC CGAAGAAGAG TCCGATGCGC TCTATGATGA AGCGGTTGCT TTCGTTACAG AGACTCGCAG AGGTTCAATA TCCAGTGTAC AGCGTAAGTT TAAAATCGGT TACAACCGCG CCGCTAGAAT CATTGAGCAG ATGGAAGCTC AGGGAGTGGT GAGCTCTCAA GGCCATAACG GTAACCGTGA GGTACTTGCG CCGCCACCGC CTAAGGCATT TTAG
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Protein sequence | MSKGNSIKTL SGVQRLLEGG LIICCMLATY VLLALSSFYS SDPGWSQSHF EGEIQNVTGA VGAWTADVLF YFFGYTAYLI PIIMALTGWL LFKRTHKLLE IDYFSVGLRL IGFLLIVFSL AALASMNAND IYEFSAGGVA GDVIRDAMLP YFNKLGTTLL LLCFVGAGFT LLTGISWLTI VDLTGFSAIW VFNSLRSLPE RFKRDSGETE DTQGFMSVFD KFKEKRNQSE DDFEDEELDS ERLDTHLNQF EELNHGEQLN TNSRIEPQLE SEEDAIDDEV HLAPSATAPE TELDEIDFDS QTSVGAVSLA KPKVVESAKI VDGIVVLPGQ DLEQAKKPIT PLPSISLLDV PNRKANPISR EELEQVGALV EVKLADFNIV AKVVGVFPGP VVTRFELELA PGVKASKVTN LSKDLARSLL AESVRVVEVI PGKAYVGIEL PNKFRETVFM RDVLDSKTFA ESKSHLSMVL GQDIAGEPVV VDLGKMPHLL VAGTTGSGKS VGVNVMITSL LYKSGPDDVR FIMIDPKMLE LSVYEGIPHL LCEVVTDMKE AANSLRWCVG EMERRYKLMS ALGVRNLKGY NAKIKEAKES GQPITDPLWK SSDSMEPEAP ELDKLPSIVV VVDEFADMMM IVGKKVEELI ARIAQKARAA GIHLILATQR PSVDVITGLI KANIPTRMAF QVSSRIDSRT ILDQQGAETL LGMGDMLYLP PGTSIPIRVH GAFIDDHEVH AVVADWHSRG KPQYIDEILQ GSTEGEQVLL PGEASDAEEE SDALYDEAVA FVTETRRGSI SSVQRKFKIG YNRAARIIEQ MEAQGVVSSQ GHNGNREVLA PPPPKAF
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