| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2092 |
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| Symbol | |
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| ID | 5610506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2534170 |
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| End bp | 2534940 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640932989 |
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| Product | ABC cobalt transporter, periplasmic binding protein CbiN |
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| Protein accession | YP_001473829 |
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| Protein GI | 157375229 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG5266] ABC-type Co2+ transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0064068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAA CCTTGTCCTT AAGCTTCATT CTTATCAGTA TTTACCTCTA TTCGTGTAAT
GTATCAGCAC ATTTCCTGGC TTTGTTCCCG GAAAAACAGG TGATTGATGC AGGAGACTCG
CGTCAGCTTC ACTTTCCCAT TCATTTTACT CACCCATCGA CCCTAGGACC CACCATGTCG
ATAGCACGTC CGGTATCGAC GGGTTATATG GTTAATGAGA CTCGTGTGGA TCTCTCCGAA
CGCCTCAAAG CCATTACCTA TGGGGGGGAA ACGAGTTGGC AATTAAATAT GAAGCTTCAG
AGGCCAGGAA CATACACCTT CTTTACCAAT CAGTCGCCCT ATCTGGATAA GACTGAAGGG
GTGGTGATCA CCCTATTCGC CAAAGTTATT GTCGATGCAT TTGCGGCGCT GGGCGAGTGG
CAGCATAGGT TAGGCACACC GGTTGAGATC ATTCCCCTGA CGCGTCCGTT TGCATTGTGG
ACCAATAGTG TATTCACGGG GCGGGTATTG ACTGAAGGTC GACCGGCAGC AAATGTCTCG
GTTGAAGTGG AATATTACAA TGACTCCGGC GTGACATTAC CTTCCGATGC ATGGGCATCG
ATAGAGGTTC GTACCAATGC CGCAGGAGAG TTTTCCGTCT CCTTACCTCG TGAAGGCTGG
TGGGGGATTG CAGCTCTTGT ATCCGATGAA GAGCCATTTA CGCTGGAAGG TAAACAATAT
CAGCACGAGC AGGCAGGCGT CATTTGGTTG CAAGTTCGGG ATATGAAATA A
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| Protein sequence | MKSTLSLSFI LISIYLYSCN VSAHFLALFP EKQVIDAGDS RQLHFPIHFT HPSTLGPTMS
IARPVSTGYM VNETRVDLSE RLKAITYGGE TSWQLNMKLQ RPGTYTFFTN QSPYLDKTEG
VVITLFAKVI VDAFAALGEW QHRLGTPVEI IPLTRPFALW TNSVFTGRVL TEGRPAANVS
VEVEYYNDSG VTLPSDAWAS IEVRTNAAGE FSVSLPREGW WGIAALVSDE EPFTLEGKQY
QHEQAGVIWL QVRDMK
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