| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1995 |
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| Symbol | |
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| ID | 5612434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2413006 |
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| End bp | 2413830 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640932881 |
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| Product | purine nucleoside phosphorylase |
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| Protein accession | YP_001473732 |
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| Protein GI | 157375132 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0005] Purine nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR01697] inosine guanosine and xanthosine phosphorylase family
[TIGR01699] xanthosine phosphorylase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0661453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000235429 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGAAGACAG ATCCTGTAGA CAATGCACTA GCCACCATTT CAGCCCTTAA ACCAAATTTC
AGACCTAAAG CTGCATTCAT CTTAGGCTCC GGCCTGGGGA TCCTTGCGGA CGAACTGGAA
GAGAGAGTCT GCATCGCCTA TGAAGAGCTT GATGGCTTCC CTATCAGCAC TGTCGAAGGT
CACTCCGGCG AGTTAGTCTT GGGGAGAATG AATGGTATCG ACGTTGTTTG CATGAAAGGC
CGCGGCCATT ACTACGAACA TCAAAGCATG AAAGTCATGA CAAATCCGGT GCGAACTTTT
AAACGTTTAG GTTGCGAACT GCTAATCGTT ACTAATGCCG CCGGGTCTTT ACGCCCCGAG
AGTATCGACG TCGGCTCCCT CGTCATTTTC AATGACCACA TCAATACCAT GCCAGGAACC
CCCATGACTG GTCGTAATGA TGACACCTAT GGCCCACGTT TTTTCAGTTT AGCGAATGCT
TATGATAAAT CCTTACGCAT GGAAGCATTG GAGGTGGCCA AAAAAGAGAA TATTCATGCC
AATGAAGGGG TATTTGTCTC CTACAGTGGT CCGAATTTCG AAACCCCTGC CGAAATACGC
ATGATGCAGA TCATAGGCGG AGACGTGGTC GGAATGTCTG TGGTACCTGA GGTCATATCT
GCAGCCCACT GTAACCTTCC CGTGCTGGCT ATCTGTGCTA TTACTAATAT GGCCGAGGGC
TTAGGAGATG TCGCCCTGTC TCATGAACAA ACACTCAAGT GTGCGAAGTT AGCACAGGAT
GACTTTATCA ACCTAATCAA GGCATTTATG GCAAATCATT TTTGA
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| Protein sequence | MKTDPVDNAL ATISALKPNF RPKAAFILGS GLGILADELE ERVCIAYEEL DGFPISTVEG
HSGELVLGRM NGIDVVCMKG RGHYYEHQSM KVMTNPVRTF KRLGCELLIV TNAAGSLRPE
SIDVGSLVIF NDHINTMPGT PMTGRNDDTY GPRFFSLANA YDKSLRMEAL EVAKKENIHA
NEGVFVSYSG PNFETPAEIR MMQIIGGDVV GMSVVPEVIS AAHCNLPVLA ICAITNMAEG
LGDVALSHEQ TLKCAKLAQD DFINLIKAFM ANHF
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