| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0872 |
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| Symbol | |
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| ID | 5611446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1036941 |
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| End bp | 1037969 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640931720 |
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| Product | uncharacterized FlgJ-related protein-like protein |
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| Protein accession | YP_001472611 |
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| Protein GI | 157374011 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2992] Uncharacterized FlgJ-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTCA ATAGCGGTAA ATTCATCATA GCGCTACTGC TAATAGGCAC CTCACTCTAT
TGGGGCGAGT CCTGGTTATC TGAGCCCCCT GAGTCTGGTG ATGTCAGTTC GAGTGAGGTC
GCTCCTGTCG CCGCTACGGC TTCAGGCAAG GCGATAAACT TAAGTTCGGC TGAAAATATT
TTGATTCAGC TGGCGCAAAA CCGTCCAACC GAAGCGGCCA AAGATGTCAG ACTAGGTTCG
TTGGACGATC TTATGGCCCT GTTCGACTCG CTCGATTACA ACACTCAAAG CTGGATTGAA
GGTAATCGTG AAGTCCCACG CCTCACCTTC GAGCGGGTCA GCGACAGTTG GCATAAGACC
TCCAATGAGA TCCCCGTACA ACAGAAGAAG ATGGTGTTCT TTCGTCTGAT GGCCCCCCTT
ATTTTGGTTG CCAACGAAAA CATTCTATTA GAGCGTCAGA TAGTCGAAAC GGCTCAACTC
AGCGACAAAA AGCTGCAAGC AATCGCGATC AAATACAAGG TGCTCACGAA GCAAGCAGCC
CCCCTGAATG AGGGCCAGCG TCAAGCTTTG TTAGCGCGAG TCGATATCAT GCCGCCTTCT
CTGGTACTGG CCCAAGCCGC AGAGGAGAGT GGATGGGCAA CATCCAGATT TACCTTAGAG
GGGAACGCCT TCTTTGGCCA ATGGGACTTC AGTGGAAATG GGATGGTGCC CAAACAGCAA
CGTAAAGAGC TGGGGAACTA TGGACTGGCA CGGTTCGATA GCCCACTGGC ATCGGTTGAA
GGTTATATGG TTAACCTCAA CACTAATAAT GCCTACCAGA AACTGCGCCA TCTTCGCGCA
GAACTCAGGC AGAACAAGCA AGCTATCACA GGAGTGTTAC TCGCAGGTAC CCTGGACAAA
TATTCTGAGC GAGGCCAGGC CTATATCGAC GGGATCAGAG AGATGATCCG CTATAACCAG
CTGGATCAGG TAGACCAGGC TTACCTCAGT AGCGCCGCTC CTCTTCATCT GATTGGTAAA
AACCAATAA
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| Protein sequence | MDLNSGKFII ALLLIGTSLY WGESWLSEPP ESGDVSSSEV APVAATASGK AINLSSAENI
LIQLAQNRPT EAAKDVRLGS LDDLMALFDS LDYNTQSWIE GNREVPRLTF ERVSDSWHKT
SNEIPVQQKK MVFFRLMAPL ILVANENILL ERQIVETAQL SDKKLQAIAI KYKVLTKQAA
PLNEGQRQAL LARVDIMPPS LVLAQAAEES GWATSRFTLE GNAFFGQWDF SGNGMVPKQQ
RKELGNYGLA RFDSPLASVE GYMVNLNTNN AYQKLRHLRA ELRQNKQAIT GVLLAGTLDK
YSERGQAYID GIREMIRYNQ LDQVDQAYLS SAAPLHLIGK NQ
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