| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0456 |
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| Symbol | |
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| ID | 5612047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 569096 |
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| End bp | 570025 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931301 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001472197 |
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| Protein GI | 157373597 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1032] Fe-S oxidoreductase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGATG CAGATTATTG CTTGTTCTTT AGTAGGGAGT GTCAGCCTTT GAACTATATT
GAGCCTTTGT TTCGTCCTCC ATCGGAATGG AAGTCACTTA TTCTGCAGGT GACTAACGGT
TGTAGTTGGA ATCGTTGCAC CTTTTGTGAC ATGTATACCG CGCCGCAGAA ACGCTTCAGG
GCGCAGAAGC TGGATAAGAT TGCTGCGGAT ATTATTGCGG TTGCAGAAAC TGGTCGCTCG
GTTCATCGGG TGTTTCTCGC CGATGGCGAT GCGATGAGCT TGCCCTTCGA CAGACTAGAG
GCCATCTGCT TGTTGATCCG TGAGCACCTG CCCGACGTCA CCCGGATCAG CAGTTACTGT
CTGCCAAGAA ACCTCAAGAA TAAGACCTCT GAAGAGTTGT CCCGTTTAAA GGCACTCGGC
TTATCCCTGC TCTATATCGG TTGCGAGAGT GGTGATGATG AGGTGCTGCG ACGGATCGAA
AAAGGTGAAA GTTTTGACTC GTCACTGGCC GCACTGAAAA AGATAAAGGC GGCAGGCATT
AAATCTTCGG TGATGATTTT AAATGGACTC GGTGGCACCG AGTTATCAAC GCAACATGCT
ATCAACTCGG CTAAGTTAAT GAATGCGTCT CAGCCTGAGT ACCTCTCTAC TCTGGTGGTT
ACGCTACCTC TGGGGACAGA GCGTATGGAT GCGAGTTTCG ATGGACATTT TCAGCTGCCG
GATCAACATG GTTTATTCGT CGAAATGCAC ACTCTATTGA AGCATCTCGA GCTGGATAAA
ACGATTTTTC GCTCGGACCA CGCTTCAAAT TACCTCGTGT TGAAAGGGAC TTTAGGTAAA
GACAAGGAGA AGTTAATAGC TCAAGTGGAA CAGGCCATGA CCAAGCCGCA GTCGAGCGGT
TTAAGACAGG AGTGGCAGCG GGGGCTTTAG
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| Protein sequence | MHDADYCLFF SRECQPLNYI EPLFRPPSEW KSLILQVTNG CSWNRCTFCD MYTAPQKRFR
AQKLDKIAAD IIAVAETGRS VHRVFLADGD AMSLPFDRLE AICLLIREHL PDVTRISSYC
LPRNLKNKTS EELSRLKALG LSLLYIGCES GDDEVLRRIE KGESFDSSLA ALKKIKAAGI
KSSVMILNGL GGTELSTQHA INSAKLMNAS QPEYLSTLVV TLPLGTERMD ASFDGHFQLP
DQHGLFVEMH TLLKHLELDK TIFRSDHASN YLVLKGTLGK DKEKLIAQVE QAMTKPQSSG
LRQEWQRGL
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