Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0307 |
Symbol | |
ID | 5609999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 360318 |
End bp | 360911 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640931139 |
Product | azoreductase |
Protein accession | YP_001472048 |
Protein GI | 157373448 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000628195 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000950602 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAAAAG TACTAATTTT AAAGTCGAGC ATTTTAGGCG ATTACTCTCA ATCCGGTCAG TTGGTTGAGC ATCTTAAGCA GCATTGGGAA CAGCAGGGAG CCGAGATCAG CGTACGTGAT CTGGCCGCAG AGCCTCTGCC AATGCTCGAT GGTGAGATTG CATCGGGTTT ACGAGGTGGT GATCAGTTAT CGGCGCGTCA GGAGCAGGCA TTGCTACTGT CAGACTCGCT TATTCAAGAG CTTAAAGCCC ATGACACCAT AGTGATTGCA GCGCCTATGT ATAACTTCAG TATTCCTACG CAGCTTAAAA ACTGGATCGA TCTGGTTGCG CGTGCCGGCG TGAGTTTCAC CTACACAGAA ACCGGACCTA AAGGTTTGAT TACGGGTAAG CGAGCCGTTT TGATCACGAC GCGAGGCGGC GTACATAAAG GTGGCGCCTC AGATCATGTG GTTCCTTACC TTAAGACAGT ACTTGGATTT ATCGGTATCG AAGAGGTTGA AACCGTGTAT AGCGAAGCTC TTAATATGGG ACCTGAGGCA TCTAAGCAGG GGATCGAGTC GGCTCAGCAA GCATTAGAAA AGATAGTGGC TTAA
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Protein sequence | MSKVLILKSS ILGDYSQSGQ LVEHLKQHWE QQGAEISVRD LAAEPLPMLD GEIASGLRGG DQLSARQEQA LLLSDSLIQE LKAHDTIVIA APMYNFSIPT QLKNWIDLVA RAGVSFTYTE TGPKGLITGK RAVLITTRGG VHKGGASDHV VPYLKTVLGF IGIEEVETVY SEALNMGPEA SKQGIESAQQ ALEKIVA
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