| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0066 |
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| Symbol | |
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| ID | 5596290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | + |
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| Start bp | 1213883 |
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| End bp | 1215604 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640929773 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001467055 |
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| Protein GI | 157163913 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.411672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAATTT GGGATCTAAA AGCACTTTTT GCAAACGAAA AAGAGTGCGA ACAAAACGCA
CTAAATTTAC AAAAAGAGTG CGAGAAATTT AAAGATAAAT ACCTTGAAAT TTATGAAAAT
TTAAAAACAG ACCAGTTTTT AAAGGCATTT GGCGAATATG AAAGTTTGAT AGCTAAAATT
TCAAAAGTAA TGACATACGC TTTTTTAAAT TTTGCCAAAG ATACAAGCAA GGGCGCATTT
TACGCGAAAA TCGATGAGAT AGCGACAAAA GCAAATGAAA ATTTGATATT TTTTGAGATC
AAATTTAATG AGTTTGCCCC TGAAAAACAA GAAGAGATCA TCAAAAGCTC TAAAAAATAT
GGCTACTATC TAAGCAACCT CGCCAAAGCA AAACCGCACC AACTAAGCGT TGCAGAAGAG
AGAGTGCTAC TTCGCACGGC AAGCACCGGA GCTGAGGGCT TTTCAAGGCT TTTTGATGAG
AGTATGAGCA AGATGAGGTT TAAATTTAAA GGCGAGCTTT TAAGTGAAGA GGAAATTTTA
GCCAAGCTTC ATGAGAGCGA CCAAAGTGTG CGAAAACTGG CCGCCAAAAG CCTTTCAAAC
GAGCTTAGCA AGCACCAGCA TCTTCTTGGT TACATATATA ATATGATAAA AACTGATCTA
AAAACGAGCT GCGAGTTGCG AAATTTCAAG CTTCCTGAAG AGCCAAGACA CCTTGAAAAT
CAAATCACTA AAAAAAGCGT TGATTCGCTA ATTGCAGTAA CTGAGAAAAA TTTCGATTTA
GTTTCTAAAT TTTACGAGCG AAAAAGAGAA ATTTTAGGCC TTAAAAAGCT TTATGACTAC
GATAGATACG CGCCTCTTAG CAGCGAGGGG GAGTATAAAT TTGATGAGTG CAAAAAGGTA
GTTTTAAAGG CGTTTGGGAC ATTTTCACCT AAATTTGGCG ATATAGCTAA AAGCGCCTTT
AGTGACGGCT GGATCGACGT TTATCCAGCG CCAAACAAGC GAGGTGGCGC GTTTTCTCAC
TCAGGATCAA GCGACACACA CCCTTACGTT TTACTAAATC ACACAAACCA GCGAAGAGAC
CTTTTCACGC TTGCCCACGA GCTTGGCCAC GCCGTGCATC AAAAGCTCTC ATATAGTGTA
AGCTACCTAA ACTCAGACAC TCCGCTAACC ACGGCTGAGA CGGCTTCTGT CTTTTGCGAG
ATGCTAGTTT TTGACCACAT AAAAGATGGC CTTAGCAAAA AAGAGAAAAT TTCACTGCTT
GCTGGCAAGA TCGAGGATAT ATTTGCCACG CTTTACCGCC AGATAAATTT CACCACCTTT
GAAAGGGCTG TGCACGCACA TGAGGGCGAG ATCGGCCTAG ATGAGCTAAA TAAAATTTGG
CTAAGAGAGA GCAAAAAGAT GTTTGGCAAA AGCGTCACGC TAAATGACTA CTACAAAATT
TGGTGGAGCT ACATCCCACA CTTCATCCAC ACGCCATTTT ACTGCTACGC CTACTCTTAT
GCGCAGCTTC TTGTGCTTGC ACTTTTTGGG CTTTACAAAA GCGGCAAATG CGAAAATTTC
GTTGAAATTT ACACCGAGTT TTTGAGCCTT GGCGGAAGCC TTAGTCCAAG GGAGCTTGTG
GGTAAATTTG GCTTTGATAT AGATGATAAA AATTTCTGGC AGATCGGCAT AAACGAGGTC
AAAAAGCTAG TAGATGAGTT TTTAGAAATT TCAAAGGATT AA
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| Protein sequence | MQIWDLKALF ANEKECEQNA LNLQKECEKF KDKYLEIYEN LKTDQFLKAF GEYESLIAKI
SKVMTYAFLN FAKDTSKGAF YAKIDEIATK ANENLIFFEI KFNEFAPEKQ EEIIKSSKKY
GYYLSNLAKA KPHQLSVAEE RVLLRTASTG AEGFSRLFDE SMSKMRFKFK GELLSEEEIL
AKLHESDQSV RKLAAKSLSN ELSKHQHLLG YIYNMIKTDL KTSCELRNFK LPEEPRHLEN
QITKKSVDSL IAVTEKNFDL VSKFYERKRE ILGLKKLYDY DRYAPLSSEG EYKFDECKKV
VLKAFGTFSP KFGDIAKSAF SDGWIDVYPA PNKRGGAFSH SGSSDTHPYV LLNHTNQRRD
LFTLAHELGH AVHQKLSYSV SYLNSDTPLT TAETASVFCE MLVFDHIKDG LSKKEKISLL
AGKIEDIFAT LYRQINFTTF ERAVHAHEGE IGLDELNKIW LRESKKMFGK SVTLNDYYKI
WWSYIPHFIH TPFYCYAYSY AQLLVLALFG LYKSGKCENF VEIYTEFLSL GGSLSPRELV
GKFGFDIDDK NFWQIGINEV KKLVDEFLEI SKD
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