Gene EcE24377A_0540 details

Gene Information

• Locus tag: EcE24377A_0540
• Symbol: selU
• ID: 5588169
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli E24377A
• Kingdom: Bacteria
• Replicon accession: NC_009801
• Strand: -
• Start bp: 565087
• End bp: 566181
• Gene Length: 1095 bp
• Protein Length: 364 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 640924262
• Product: tRNA 2-selenouridine synthase
• Protein accession: YP_001461689
• Protein GI: 157156550
• COG category: [R] General function prediction only
• COG ID: [COG2603] Predicted ATPase
• TIGRFAM ID: [TIGR03167] tRNA 2-selenouridine synthase

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGAGA GACACACGGA ACAGGACTAT CGTGCCCTGC TGATTGCTGA TACGCCCATT 
ATTGATGTTC GCGCCCCTAT CGAGTTTGAG CAAGGCGCAA TGCCCGCCGC TATCAATCTG 
CCGTTAATGA ATAACGATGA ACGCGTCGCC GTTGGCACCT GTTATAAACA GCAAGGGTCA 
GACGCGGCGC TGGCGCTGGG TCATAAACTG GTGGCGGGTG AAATTCGTCA GCAGCGTATG 
TACGCCTGGC GGGCAGCGTG CCTGCAAAAT CCGCAAGGTA TTCTCTGCTG CGCCCGTGGC 
GGTCAGCGCT CACATATTGT GCAAAGCTGG TTGCATGCAG CGGGGATTGA TTATCCGCTG 
GTGGAAGGCG GTTATAAGGC ACTGCGCCAG ACCACGATTC AGGCGACTAT TGAACTGGCA 
CAAAAACCGA TAGTGCTGAT TGGCGGTTGT ACCGGCTGCG GCAAAACGCT GTTAGTGCAA 
CAACAGCCGA ACGGTGTTGA TCTGGAAGGG CTGGCGCGTC ATCGCGGTTC GGCGTTTGGT 
CGCACCTTAC AACCACAACT TAGCCAGGCG AGTTTTGAAA ACCTGCTGGC TGCCGAAATG 
CTAAAAACCG ACGCCCGTCA GAATTTGCGC CTGTGGGTGC TGGAAGACGA AAGCCGGATG 
ATCGGTTCGA ATCACCTGCC GGAATGCCTG CGCGAGCGAA TGACTCAGGC GGCGATTGCG 
GTGGTAGAAG ATCCGTTTGA GATCCGTCTT GAGCGCCTGA ACGAAGAGTA TTTCTTGCGT 
ATGCATCATG ATTTTACCCA CGCGTACGGC GACGAACAGG GCTGGCAGGA GTATTGCGAA 
TACCTGCATC ACGGACTTTC GGCGATCAAG CGTCGGCTGG GGCTACAGCG CTATAACGAA 
CTGGCTGCAA GGCTGGATGC AGCGCTGACA ACGCAACTCG CAACCGGTAG CACCGACGGT 
CATCTGGCCT GGCTGGTGCC GTTACTTAAA GAATATTACG ACCCAATGTA TCGCTATCAG 
CTTGAGAAAA AAGCGGAAAA AGTTGTCTTT CGCGGTGAGT GGGCGGAAGT GGCGGAATGG 
GTTAAGGCGC GGTAA 

 

Protein sequence

MQERHTEQDY RALLIADTPI IDVRAPIEFE QGAMPAAINL PLMNNDERVA VGTCYKQQGS 
DAALALGHKL VAGEIRQQRM YAWRAACLQN PQGILCCARG GQRSHIVQSW LHAAGIDYPL 
VEGGYKALRQ TTIQATIELA QKPIVLIGGC TGCGKTLLVQ QQPNGVDLEG LARHRGSAFG 
RTLQPQLSQA SFENLLAAEM LKTDARQNLR LWVLEDESRM IGSNHLPECL RERMTQAAIA 
VVEDPFEIRL ERLNEEYFLR MHHDFTHAYG DEQGWQEYCE YLHHGLSAIK RRLGLQRYNE 
LAARLDAALT TQLATGSTDG HLAWLVPLLK EYYDPMYRYQ LEKKAEKVVF RGEWAEVAEW 
VKAR