Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A4538 |
Symbol | fimB |
ID | 5593503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 4545960 |
End bp | 4546562 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640923634 |
Product | tyrosine recombinase |
Protein accession | YP_001461074 |
Protein GI | 157163756 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0000945122 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAATA AGGCTGATAA CAAAAAAAGG AACTTCCTGA CCCATAGTGA AATCGAATCA CTCCTTAAAG CAGCCAATAC CGGGCCTCAT GCAGCACGTA ATTATTGTCT GACTTTGCTT TGTTTTATTC ATGGTTTCCG GGCGAGTGAA ATTTGTCGAT TGAGGATTTC GGATATTGAT CTTAAGGCAA AGTGTATATA TATCCATCGA TTAAAAAAAG GCTTTTCAAC AACGCATCCG CTATTGAACA AAGAAGTTCA GGCTTTAAAA AACTGGTTGA GTATCCGTAC TTCGTACCCG CATGCTGAGA GCGAGTGGGT ATTTTTATCT CGTAAGGGAA ATCCGCTTTC TCGGCAACAG TTTTACCATA TTATCTCGAC TTCCGGTGGT AATGCCGGGT TGTCACTGGA GATTCATCCG CACATGTTAC GCCATTCGTG TGGTTTTGCT TTGGCGAATA TGGGAATAGA TACGCGACTT ATCCAGGATT ATCTTGGGCA TCGCAATATT CGTCATACTG TCTGGTATAC CGCCAGCAAT GCAGGGCGTT TTTACGGCAT CTGGGATAGA GCCAGAGGAC GACAGCGTCA CGCTGTTTTA TAG
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Protein sequence | MKNKADNKKR NFLTHSEIES LLKAANTGPH AARNYCLTLL CFIHGFRASE ICRLRISDID LKAKCIYIHR LKKGFSTTHP LLNKEVQALK NWLSIRTSYP HAESEWVFLS RKGNPLSRQQ FYHIISTSGG NAGLSLEIHP HMLRHSCGFA LANMGIDTRL IQDYLGHRNI RHTVWYTASN AGRFYGIWDR ARGRQRHAVL
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