Gene VIBHAR_05853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05853 
Symbol 
ID5557753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp1037801 
End bp1038250 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content45% 
IMG OID640910327 
Producthypothetical protein 
Protein accessionYP_001447974 
Protein GI156977068 
COG category[S] Function unknown 
COG ID[COG3521] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03352] type VI secretion lipoprotein, VC_A0113 family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGGGGC AATTTAAAGA ATCAACAGGC ATTACGCCAG AAACGTCCTC AATCGAATTA 
GTGATTGAGG CGTCTTCGGT TCTGAATGTT CGTGAAGGTG GGCAATCCTC TCCAGTTATT 
TTGCGAGTTC ATGAGCTGAC ATCACCCGTG TTGTTTCGCA GCTTAGACTT CTTCGCTTTG 
TTTGAGAACG ATAAAGCATC ACTGGGTGAT GAATACATCA AACGTTATGA ATACCAAATG 
CAGCCTGGTG AAAAGATCCA CGAATTCTTG GAGCTTGACC CAGCAACCCG TGCGGTTGGA 
TTCTCAGTCG CGTTTCGCGA TATCGACGGC TCTTCTTGGC GTAAAGTCGA AGTGATTGAA 
GAGAAGAGCG AGTACTACAT CAAACTCAAG TTAGAAGGCA GTGAGTTAAT TTCTGACAAC 
ACTCGCGGCA TTGAACAAGT TTACTTTTAA
 
Protein sequence
MWGQFKESTG ITPETSSIEL VIEASSVLNV REGGQSSPVI LRVHELTSPV LFRSLDFFAL 
FENDKASLGD EYIKRYEYQM QPGEKIHEFL ELDPATRAVG FSVAFRDIDG SSWRKVEVIE 
EKSEYYIKLK LEGSELISDN TRGIEQVYF