Gene VIBHAR_03430 details

Gene Information

• Locus tag: VIBHAR_03430
• ID: 5553580
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 3474234
• End bp: 3476153
• Gene Length: 1920 bp
• Protein Length: 639 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640908910
• Product: beta-N-hexosaminidase
• Protein accession: YP_001446602
• Protein GI: 156975695
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG3525] N-acetyl-beta-hexosaminidase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATACC GTGTTGATTT AGTGGTCCTT TCTGAGCAAA AACAAAACTG CCGCTTCGGA 
CTCACCTTTC ATAACTTGAG TGACCAAGAC CTAAACAGCT GGAGCTTAAC TTTTGCTTTT 
GATCGCTACA TCCTTCCTGA TAGCGTTTCA AATGGCCACC TGACTCAAGT TGGTAGCTTT 
TGTACGCTCA AGCCTGAGGG CATGGCACTG GCAGCCAACC ACCACTATTA CTGTGAATTT 
AGTATTGGCT CCAACCCATT CCGTTATTAC TCGGATGGCT TTAACGAGGC GATGATCGAC 
TTTGTGGTTG ATGGTACTCC TCAACGTGCA CAAGTGGACG TCACTCCTAT CGTTCTCGCT 
TCACCGTATC GTGAACGCAG TGAGATTCCA GCAAGCTTGA CACATGCTCA ACCTTTACTG 
CCTAAGCCAA ATCATATTGA AGTCAGCGAT CAGTCTTTCA CCTTTGATGA GCAAGCTGGT 
GTCGCGATTT ATACCGACTT AGCCACTTCT GCCAAATCGT GGTTACAGGA TGAGTTAAAG 
CGAATCTATC AATTTGAGCT ACCTTCTTCA AACAGCGGAA AAATCCTGTT CAAAAGTAAT 
CCAACCTTGG ATGAAGGCAC CTACAAGCTA AAAGTCTCTG AAGAGTCGAT CAAGATCGAA 
GCTGGCTCTT CATCAGGTTT TACTCATGCT TGCGCGACCT TATTGCAACT TCTAAAACGA 
GACGAAACGA CCAATACCAT GGACGTGGTG TGTTGCTCTA TTAAAGACAG CCCTCGTTTT 
CGATACCGCG GCATGATGCT GGATTGCGCT CGCCATTTCT ATTCCGTAGA GCAAGTAAAA 
CGCCTGATCA ACTTATTGGC ACACTACAAA TTCAACACGT TCCATTGGCA CCTCACTGAC 
GATGAAGGCT GGCGCATCGA GATCAAATCT CTGCCTCAGC TTACGGATAT TGGTGCATGG 
CGCGGTATTG ATGACACCAT CGAACCGCAA TACACCCATT TATCTCAACG CTACGGCGGC 
TTCTATACGC AAGAAGAAAT CAAAGACGTT ATCGAATTTG CAGCGCAACG CGGCATCACC 
ATCATTCCTG AAATTGATGT TCCTGGTCAT TGCCGCGCGG CAATCAAGTC TCTACCACAT 
CTATTGGTTG AAGCAGAAGA CACCACTGAG TATCGCAGTA TTCAGCACTA CAACGACAAC 
GTCATCAACC CTGCTCTGCC GGGTAGTTAC GAGTTTATAG ACAAGGTACT TGAAGAAATC 
GCAGCTCTCT TCCCTGCCCC ATATGTTCAC ATTGGTGCAG ACGAAGTGCC TAATGGAGTC 
TGGTCGAAAA GTCCTGCTTG CCAAGCGTTT ATGGAGCAAT TGGGTTATAC CGATTACAAA 
GAACTGCAAG GCCACTTCCT ACGTCATGCA GAAGACAAAC TGCGCAAACT GGGTAAACGT 
ATGCTGGGTT GGGAAGAAGC TCAACACGGC AACAAAGTCA GCAAAGATAC GGTGATCTAC 
TCATGGCTAA GCGAAGAAGC GGCATTGAAC TGTGCTCGCC AAGGCTTTGA TGTAGTGCTG 
CAACCCGCAC AAACCACTTA CCTAGATATG ACCCAAGACT ACGCACCTGA AGAACCGGGC 
GTGGACTGGG CAAACCCACT GCCACTAGAA AAAGCTTACA ACTACGAGCC GTTAGCAGAA 
GTCCCTGCCG ACGACCCAAT CAGAAAACGC ATTTGGGGCA TTCAAACCGC TCTATGGTGC 
GAAATCATCA ACAACCCATC GCGCATGGAC TACATGATTT TCCCTCGCCT GACTGCCATG 
GCAGAAGCAT GTTGGACTGA AAAACAACAC CGCGATTGGA CCGACTATTT ATCACGTTTG 
AAAGGACACC TTCCTCTGCT CGACTTGCAG GGAGTGAATT ACCGTAAACC GTGGAAGTAA 

 

Protein sequence

MEYRVDLVVL SEQKQNCRFG LTFHNLSDQD LNSWSLTFAF DRYILPDSVS NGHLTQVGSF 
CTLKPEGMAL AANHHYYCEF SIGSNPFRYY SDGFNEAMID FVVDGTPQRA QVDVTPIVLA 
SPYRERSEIP ASLTHAQPLL PKPNHIEVSD QSFTFDEQAG VAIYTDLATS AKSWLQDELK 
RIYQFELPSS NSGKILFKSN PTLDEGTYKL KVSEESIKIE AGSSSGFTHA CATLLQLLKR 
DETTNTMDVV CCSIKDSPRF RYRGMMLDCA RHFYSVEQVK RLINLLAHYK FNTFHWHLTD 
DEGWRIEIKS LPQLTDIGAW RGIDDTIEPQ YTHLSQRYGG FYTQEEIKDV IEFAAQRGIT 
IIPEIDVPGH CRAAIKSLPH LLVEAEDTTE YRSIQHYNDN VINPALPGSY EFIDKVLEEI 
AALFPAPYVH IGADEVPNGV WSKSPACQAF MEQLGYTDYK ELQGHFLRHA EDKLRKLGKR 
MLGWEEAQHG NKVSKDTVIY SWLSEEAALN CARQGFDVVL QPAQTTYLDM TQDYAPEEPG 
VDWANPLPLE KAYNYEPLAE VPADDPIRKR IWGIQTALWC EIINNPSRMD YMIFPRLTAM 
AEACWTEKQH RDWTDYLSRL KGHLPLLDLQ GVNYRKPWK