Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01330 |
Symbol | |
ID | 5555878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 1337730 |
End bp | 1339118 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640906822 |
Product | hypothetical protein |
Protein accession | YP_001444534 |
Protein GI | 156973627 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3104] Dipeptide/tripeptide permease |
TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAACC AACATCAATA CTTTGGTCAC CCACGTGGCT TGTTCCTTCT GTTCGGTACA GAATTATGGG AACGCTTTTC TTACTACGCA ATGCGCGCCA TTCTAGTACT TTATCTTACA GACACAACAA TGAACGGCGG TCTTGGCTGG TCGACTAAAG ATGCTCTAGA TCTTTACGGC ATCTATACTG GACTTGTCTA CATCACCCCT CTTATTGGTG GCTACCTTGC AGATAACTAC CTAGGTCAAC GCCGTTCTAT CCTTATTGGT GGCGCGTTGA TGGCTATTGG CCAATTTACG CTAGCAATGC CAGCAGATGC TCTGGGTCTT GGCTCTTTAC ACACTTTCTA CCTAGGTCTT GCTCTACTTA TCTGTGGTAA CGGTCTATTC AAGCCAAACA TCTCTACAAT GGTTGGCGAT CTATACAATG AAGGCGATAA CCGTCGTGAT GGCGCTTTCA CTATCTTTTA CATGGGTATC AACCTAGGTG CGTTGCTGGC TGGTGTTGTA TCGGGCTCTG TAACGAACGA ATTTGGCTGG AAAGCAGGCT TCGTTGCTGC CGGTATTGGT ATGCTTGTTA GCCTTGTGAT GCAAATGACA ATGGCGCAAT CTTGGTTAGG TGACATTGGC CGCGTACCAG CAGCAAAACG TGACCTAGCA ATTAAGAAAT CTGCGAAGAA AGAGCCACTA ACCAAAGAAG AAGTTGACCG AATCAAAGTT ATCCTCGTGA TGAGCCTGTT TACTATCGTT TTCTGGGCAG GCTTCGAGCA GGCTGGCGGT CTAATGAACA TCTACACGCA GCAATACACA GATCGTATGA TTGGTGGCTT CGAAGTGCCA GCTGCGTGGT TCCAATCACT AAACCCGTTC TTCATTATTA CTCTTGCACC TGTATTAGCC GTTTTGTGGG TGAAGCTGGG TAAACGTGAA CCTAACTCAC CGATGAAATT TGCCCTAGCG ATGTTCTTCC TAGCACTGGG TTTCCTATGT ATGGTTGGTG CTGTTATGGA GCAAGGTGGT GATACTGCGG TTAAAACATC AATGCTATGG CTAGTAGGTG CGTTCTTCTT CCATACGCTT GGTGAACTGT GTCTATCTCC TATTGGTCTA TCTCTAGTAA CTAAGCTAGC TCCGCTACGT CTTGCATCGC TTATGATGGG CGCATGGTTC GGCTGTAACG CAATCGCAAA CTACGTTGCA GGTTATGTTG GCTCTCACGT AGGTGAACTA GGCGCACTAG CAATCTTCAG TGGTATTGCG GTAACCGCGG CGATTTCTGG CGTGATTCTA TTGTTGTTCT CTAACACGCT AGTTCGTTGG ATGCATGGTG CTGAAAATAC TCACAGCACA GCAGAACAAA TTGAAGAGCA ACAAACTCAA GTCGCTTAA
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Protein sequence | MSNQHQYFGH PRGLFLLFGT ELWERFSYYA MRAILVLYLT DTTMNGGLGW STKDALDLYG IYTGLVYITP LIGGYLADNY LGQRRSILIG GALMAIGQFT LAMPADALGL GSLHTFYLGL ALLICGNGLF KPNISTMVGD LYNEGDNRRD GAFTIFYMGI NLGALLAGVV SGSVTNEFGW KAGFVAAGIG MLVSLVMQMT MAQSWLGDIG RVPAAKRDLA IKKSAKKEPL TKEEVDRIKV ILVMSLFTIV FWAGFEQAGG LMNIYTQQYT DRMIGGFEVP AAWFQSLNPF FIITLAPVLA VLWVKLGKRE PNSPMKFALA MFFLALGFLC MVGAVMEQGG DTAVKTSMLW LVGAFFFHTL GELCLSPIGL SLVTKLAPLR LASLMMGAWF GCNAIANYVA GYVGSHVGEL GALAIFSGIA VTAAISGVIL LLFSNTLVRW MHGAENTHST AEQIEEQQTQ VA
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