Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01130 |
Symbol | |
ID | 5553607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 1144499 |
End bp | 1146163 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640906622 |
Product | recombination and repair protein |
Protein accession | YP_001444347 |
Protein GI | 156973440 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0497] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGCTC ATCTAAGTGT TAATAATTTT GCGATTGTTA AGTCTTTACA GCTCGAGCTT TCAAAGGGCA TGACCACCAT CACTGGTGAA ACAGGTGCAG GTAAATCCAT TGCAATTGAT GCTTTAGGTC TTTGTTTAGG CGGGCGTGCC GATGCAGGCA TGGTTCGACA AGGCGAAGAA AAAACCGAAG TCAGCGCTGC CTTTTTACTG GACAACAATC TACACGCAAC GCGTTGGCTA GAAGATAATG ACCTGCTGGA TGGCAGCGAA TGTATCTTGC GTCGCATCAT CACCAAAGAG GGCCGCTCTA GAGCCTTCAT CAACGGCAGC CCAGTCCCAC TTTCACAACT CAAATCTCTT GGGCAGTTGT TGATCAACAT CCATGGGCAG CACGCACATC ATCAATTGAT GAAAAGCGAG CATCAAATGG CCATGCTTGA CCAATATGCA GGACATTTAA ACCTATTAAA AAGCACACGC AGTGCTTACC AGCATTGGCG TCAGGCAGAC AATAACCTTA AGCAGCTAAA AGAGAACAGC CAGCAAAACC AGGCACAAAA ACAGTTGCTT GAATACCAAA TCAAAGAACT GAATGAGTTA TCGCTAGGTG AAGAAGAATT CGCAGAGCTC GAGCAAGAGC ACAAACGACT GTCCAACAGC GGTGAACTTG CCGCTACCTG TCAGCAAGCC ATCGAACTTA TTTACGAAGG TGAAGAAGTC AATGCGCTTG GTATTTTGCA ATCGGCCAAT CACTCCCTAA TCCAATTAGC GGAATTAGAT GAGAAACTCG CTGAACTACC AAACATGCTG TCAGAAGCAA TGATCCAGCT AGAAGAAACC AAAAACGAAC TTCGCAGCTA CCTTGACGGC ATTGATGTCG ATCCGGGTCG TATGGCTTAT GTCGAAGAAC GTTTTTCTAA AGTGATGTCG ATGGCTCGCA AACACCATGT GATGCCTGAT GAGCTATACC AGCACCACCA AGATCTGCTG GCACAAATCG AAGCACTAGA TTGCTCCGAT GAACGCTTAG ATGAGTTAGC ACAAGAAGTG GAGCAGAAAT ACCAAAGCTT CTTAACTCAA GCAGAAAAAC TGCACAAATC ACGCAGCCGT TATGCTAAAG AATTGAACAA GCTGATCACC CAAAGCATGC ACGAGTTGAG CATGGAAAAA GCCGTGTTCA GTATCGAAGT GAACAACGAA AACGCGCATC CATCTCCGCT AGGCATGGAC AGCGTATGCT TTTTGGTTTC AACCAACCCA GGCCAACCAT TACAACCTAT CGCTAAAGTC GCGTCTGGCG GTGAGCTATC ACGTATCTCC TTAGCGATCC AAGTGATCAC AGCGCAGAAA GTTGACACAC CAAGCTTGAT CTTTGACGAA GTGGATGTAG GTATCAGCGG CCCAACCGCC GCCGTAGTTG GCAAGATGCT GCGCAAACTG GGCGAATCAA CCCAAGTTAT GTGTGTTACC CACTTGCCGC AAGTTGCTGG CTGCGGTCAC CAGCAGATGT TTGTAGCCAA ACACACCAAA GGCGGCCAAA CTGAAACACA AATGCGCTCA CTAGATGAAG AACAACGCGT GGCAGAACTC GCTCGCCTAC TTGGTGGCAG CCAAATCACT GACTCTACAT TGGCAAACGC AAAAGAACTG CTTATCGCGG CTTAA
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Protein sequence | MLAHLSVNNF AIVKSLQLEL SKGMTTITGE TGAGKSIAID ALGLCLGGRA DAGMVRQGEE KTEVSAAFLL DNNLHATRWL EDNDLLDGSE CILRRIITKE GRSRAFINGS PVPLSQLKSL GQLLINIHGQ HAHHQLMKSE HQMAMLDQYA GHLNLLKSTR SAYQHWRQAD NNLKQLKENS QQNQAQKQLL EYQIKELNEL SLGEEEFAEL EQEHKRLSNS GELAATCQQA IELIYEGEEV NALGILQSAN HSLIQLAELD EKLAELPNML SEAMIQLEET KNELRSYLDG IDVDPGRMAY VEERFSKVMS MARKHHVMPD ELYQHHQDLL AQIEALDCSD ERLDELAQEV EQKYQSFLTQ AEKLHKSRSR YAKELNKLIT QSMHELSMEK AVFSIEVNNE NAHPSPLGMD SVCFLVSTNP GQPLQPIAKV ASGGELSRIS LAIQVITAQK VDTPSLIFDE VDVGISGPTA AVVGKMLRKL GESTQVMCVT HLPQVAGCGH QQMFVAKHTK GGQTETQMRS LDEEQRVAEL ARLLGGSQIT DSTLANAKEL LIAA
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