Gene Rcas_4263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4263 
Symbol 
ID5541774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5503688 
End bp5504467 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content61% 
IMG OID640896370 
Productcobalt ABC transporter, ATPase subunit 
Protein accessionYP_001434308 
Protein GI156744179 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID[TIGR01166] cobalt transport protein ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.493384 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCT CCGATCTTAC GGTTAATGCA TCGCTTTCCG TCGACCATAC GCCGCTGCTG 
CTGATCGACG ATCTGCACTT CGCCTATCCC GATGGGCGTG TGGCGCTTCG TGGCGTTCAT
TTGCGCATTG CGCGCGGTGA GAAGGTGGCG CTGGTTGGAC CGAACGGCGC CGGCAAGAGC
ACGCTGCTAT TGCACCTCAA CGGTGTTCTG CGCGGCAACG GGCGCATCGA AGTCGCTGGC
TTGCCGGTGA GTGAGCGTAC CCTGTCGCAA GTGCGCGCGC GAGTCGGTCT TGTGTTTCAA
AATCCCGATG ACCAGTTATT TTCACCGACG GTCTTTGAGG ATGTGGCGTT CGGTCCGTTG
CACATGGGGC TTGCGGCGCG CGACGTGCAG GCGCGGGTCG AACGAGCGCT GGCGCTGGTC
GGGATGAGTA CGTATCGCGA GCGGCATCCA TACCATTTGA GCATGGGGGA AAAGAAGCGC
ATCGCGATTG CGACGGTGCT GGCGATGGAA CCGGAGATTC TGGCGTTCGA CGAGCCTTCC
GCCGGTCTCG ACCCGCGCGC CCGCCGTGGA TTGATCCGTT TGCTGCGCGA TTTGCCGCTG
ACCATGCTGG TTTCGACGCA TGATATGGCG ATGGTTCAGG AACTTTGCGA TCGGATGATT
ATCATGGACG AAGGGCGCAT CGTCGCTGAT GGCACAGCGG CGACGATGCT CGACGACGAG
GCGCTGCTCG AGGCGCATGG TCTGGAAACG CCCTGGAAAG AGCGAGGAGT GCGTGACTGA
 
Protein sequence
MLRSDLTVNA SLSVDHTPLL LIDDLHFAYP DGRVALRGVH LRIARGEKVA LVGPNGAGKS 
TLLLHLNGVL RGNGRIEVAG LPVSERTLSQ VRARVGLVFQ NPDDQLFSPT VFEDVAFGPL
HMGLAARDVQ ARVERALALV GMSTYRERHP YHLSMGEKKR IAIATVLAME PEILAFDEPS
AGLDPRARRG LIRLLRDLPL TMLVSTHDMA MVQELCDRMI IMDEGRIVAD GTAATMLDDE
ALLEAHGLET PWKERGVRD