Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4263 |
Symbol | |
ID | 5541774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5503688 |
End bp | 5504467 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640896370 |
Product | cobalt ABC transporter, ATPase subunit |
Protein accession | YP_001434308 |
Protein GI | 156744179 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1122] ABC-type cobalt transport system, ATPase component |
TIGRFAM ID | [TIGR01166] cobalt transport protein ATP-binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.493384 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGCT CCGATCTTAC GGTTAATGCA TCGCTTTCCG TCGACCATAC GCCGCTGCTG CTGATCGACG ATCTGCACTT CGCCTATCCC GATGGGCGTG TGGCGCTTCG TGGCGTTCAT TTGCGCATTG CGCGCGGTGA GAAGGTGGCG CTGGTTGGAC CGAACGGCGC CGGCAAGAGC ACGCTGCTAT TGCACCTCAA CGGTGTTCTG CGCGGCAACG GGCGCATCGA AGTCGCTGGC TTGCCGGTGA GTGAGCGTAC CCTGTCGCAA GTGCGCGCGC GAGTCGGTCT TGTGTTTCAA AATCCCGATG ACCAGTTATT TTCACCGACG GTCTTTGAGG ATGTGGCGTT CGGTCCGTTG CACATGGGGC TTGCGGCGCG CGACGTGCAG GCGCGGGTCG AACGAGCGCT GGCGCTGGTC GGGATGAGTA CGTATCGCGA GCGGCATCCA TACCATTTGA GCATGGGGGA AAAGAAGCGC ATCGCGATTG CGACGGTGCT GGCGATGGAA CCGGAGATTC TGGCGTTCGA CGAGCCTTCC GCCGGTCTCG ACCCGCGCGC CCGCCGTGGA TTGATCCGTT TGCTGCGCGA TTTGCCGCTG ACCATGCTGG TTTCGACGCA TGATATGGCG ATGGTTCAGG AACTTTGCGA TCGGATGATT ATCATGGACG AAGGGCGCAT CGTCGCTGAT GGCACAGCGG CGACGATGCT CGACGACGAG GCGCTGCTCG AGGCGCATGG TCTGGAAACG CCCTGGAAAG AGCGAGGAGT GCGTGACTGA
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Protein sequence | MLRSDLTVNA SLSVDHTPLL LIDDLHFAYP DGRVALRGVH LRIARGEKVA LVGPNGAGKS TLLLHLNGVL RGNGRIEVAG LPVSERTLSQ VRARVGLVFQ NPDDQLFSPT VFEDVAFGPL HMGLAARDVQ ARVERALALV GMSTYRERHP YHLSMGEKKR IAIATVLAME PEILAFDEPS AGLDPRARRG LIRLLRDLPL TMLVSTHDMA MVQELCDRMI IMDEGRIVAD GTAATMLDDE ALLEAHGLET PWKERGVRD
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