Gene Rcas_4252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4252 
Symbol 
ID5541763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5494738 
End bp5495475 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content63% 
IMG OID640896359 
Productphosphoglycerate mutase 
Protein accessionYP_001434297 
Protein GI156744168 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGTAC TGCTACTGAT TCGTCACGGC GCAAACGACA TGGTCCATGG TCGGCTCGCC 
GGTCGTCTCC CCGGGGTGCG ATTGAACGAG GAAGGGCGGC GTCAGGCGGC GAGTCTGGCG
GCGCGCCTGG CGGATCTGCC GATTGAGGCA GTGTATTCCA GTCCGCTGGA TCGCACGGTC
GAAACGGCAG AAGCCATTGC CGCGCCGCGC GGTCTTCCGA TCCGGTTGGT CGAGGCGCTG
CAAGAGGTCG ATTATGGCGA GTGGCAGGGC GCTGAACTCA AGGAACTGTA CAAGCACGAG
TTGTGGCCCG GCGTCCAGCA TTATCCCAGT GGCACCCGCT TCCCGAACGG CGAAACGCTG
GGTGAGACCC AGATGCGCAT TGTTGCTGCG CTCGACGCAT TGCGCGCGCG TCACCCGAAA
GGGATGATTG CCGTCGTTTC GCATGCCGAT GCAATTCGCC TGGCGACAGC ATACTATATC
GGTATTCACA TCGACCTGTT TCAGCGGCTC GAAGTCGCTA CCTGCTCGGT GACGGCAATC
GGCTTCACCC GGATGGGACC GCGGTTGCTG GCGTATAACG ATACCGGTTC GCTGGCGCAT
TTGAAGCCAA AGCCGGAAGA AGCCCAACCT GCACCCTCTG AGGCGTCGCC GCAATCCGGG
CAGGCGGCGG AAGCAGCGAC CGGAAACGGC GTCGCTGCGC CAACCGCAGC AGCGACCGGC
GCGACCACAC CGGCGTAG
 
Protein sequence
MTVLLLIRHG ANDMVHGRLA GRLPGVRLNE EGRRQAASLA ARLADLPIEA VYSSPLDRTV 
ETAEAIAAPR GLPIRLVEAL QEVDYGEWQG AELKELYKHE LWPGVQHYPS GTRFPNGETL
GETQMRIVAA LDALRARHPK GMIAVVSHAD AIRLATAYYI GIHIDLFQRL EVATCSVTAI
GFTRMGPRLL AYNDTGSLAH LKPKPEEAQP APSEASPQSG QAAEAATGNG VAAPTAAATG
ATTPA